Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL158825.1-201ENST00000414735 521 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 PTCD2P2-201ENST00000415579 1095 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 LIPT1P1-201ENST00000415870 1186 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 OSTCP5-201ENST00000425293 453 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.13□□□□□ -1.43
CLRN1P58418 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.13□□□□□ -1.43
CLRN1P58418 MTCYBP29-201ENST00000436327 1006 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.13□□□□□ -1.43
CLRN1P58418 RPL6P30-201ENST00000443382 862 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AC005517.1-201ENST00000452091 489 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 VN1R40P-201ENST00000455196 941 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.13□□□□□ -1.43
CLRN1P58418 RPS26P11-201ENST00000463445 348 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 RPS26P6-201ENST00000475156 348 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 RN7SL379P-201ENST00000479912 293 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 RN7SL382P-201ENST00000482631 282 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 RPL21P47-201ENST00000483696 477 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AC025271.1-201ENST00000485045 429 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.13□□□□□ -1.43
CLRN1P58418 AC021146.11-201ENST00000503319 491 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AC021220.1-201ENST00000507445 630 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.13□□□□□ -1.43
CLRN1P58418 HPRT1P1-201ENST00000509498 657 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.13□□□□□ -1.43
CLRN1P58418 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.13□□□□□ -1.43
CLRN1P58418 AP006587.5-201ENST00000532033 739 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AP000916.1-201ENST00000533869 835 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.13□□□□□ -1.43
CLRN1P58418 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 AC009097.3-201ENST00000563557 1018 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 EIF4A3P1-201ENST00000578499 647 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.13□□□□□ -1.43
CLRN1P58418 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.13□□□□□ -1.43
CLRN1P58418 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.13□□□□□ -1.43
CLRN1P58418 AC073137.1-201ENST00000605636 634 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AC025171.4-201ENST00000607250 1047 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.13□□□□□ -1.43
CLRN1P58418 AL121782.1-201ENST00000611242 413 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 AL035461.2-201ENST00000619201 524 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AC008626.2-201ENST00000624425 248 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 MIR665-201ENST00000635949 72 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 AC102941.1-201ENST00000567616 1537 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.13□□□□□ -1.43
CLRN1P58418 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.13□□□□□ -1.43
CLRN1P58418 ZNF90P1-201ENST00000480493 1951 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.13□□□□□ -1.43
CLRN1P58418 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.12□□□□□ -1.43
CLRN1P58418 AL157831.2-201ENST00000564681 3095 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CLRN1P58418 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CLRN1P58418 RNU6-1251P-201ENST00000364502 107 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 DLEU2L-201ENST00000371086 3555 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CLRN1P58418 AL049545.1-201ENST00000401856 572 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 RN7SKP268-201ENST00000411107 316 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 Z68694.1-201ENST00000413929 841 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 RPL22P18-201ENST00000417197 377 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 KRR1P1-201ENST00000419430 803 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AC010099.3-201ENST00000423896 409 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 AL160175.1-201ENST00000428124 247 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 RPS6P15-201ENST00000431996 751 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.12□□□□□ -1.43
CLRN1P58418 CR769776.1-201ENST00000441254 787 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 OR2L9P-201ENST00000444456 913 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 OR6K5P-201ENST00000447050 945 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms