Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 AC079922.1-201ENST00000443291 359 ntBASIC6.13□□□□□ -1.43
CDH13P55290 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH13P55290 RPL5P33-201ENST00000487833 905 ntBASIC6.13□□□□□ -1.43
CDH13P55290 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH13P55290 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 RNA5SP400-201ENST00000517155 111 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH13P55290 HNRNPRP2-201ENST00000528421 743 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH13P55290 OR9G2P-201ENST00000533326 880 ntBASIC6.13□□□□□ -1.43
CDH13P55290 SLC25A51P2-201ENST00000535708 889 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AC025423.2-201ENST00000537570 439 ntBASIC6.13□□□□□ -1.43
CDH13P55290 RPL3P13-201ENST00000550415 216 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AC023080.1-201ENST00000551663 931 ntBASIC6.13□□□□□ -1.43
CDH13P55290 CHEK2P2-201ENST00000554701 672 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH13P55290 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH13P55290 AC068408.1-201ENST00000577406 1144 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AC027229.1-201ENST00000583887 253 ntBASIC6.13□□□□□ -1.43
CDH13P55290 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH13P55290 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 AC005332.4-201ENST00000592752 579 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 AC116667.2-201ENST00000641075 823 ntBASIC6.13□□□□□ -1.43
CDH13P55290 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.13□□□□□ -1.43
CDH13P55290 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 CASC19-255ENST00000641733 1385 ntBASIC6.13□□□□□ -1.43
CDH13P55290 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH13P55290 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH13P55290 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
CDH13P55290 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH13P55290 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
CDH13P55290 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 MTND4LP21-201ENST00000415303 295 ntBASIC6.12□□□□□ -1.43
CDH13P55290 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CDH13P55290 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH13P55290 HDAC1P2-201ENST00000453661 1398 ntBASIC6.12□□□□□ -1.43
CDH13P55290 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.12□□□□□ -1.43
CDH13P55290 AC073594.1-201ENST00000462065 364 ntBASIC6.12□□□□□ -1.43
CDH13P55290 AL079303.1-201ENST00000486611 463 ntBASIC6.12□□□□□ -1.43
CDH13P55290 RN7SL714P-201ENST00000487050 298 ntBASIC6.12□□□□□ -1.43
CDH13P55290 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH13P55290 MINOS1P4-201ENST00000515470 318 ntBASIC6.12□□□□□ -1.43
CDH13P55290 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 AC130364.2-201ENST00000528639 604 ntBASIC6.12□□□□□ -1.43
CDH13P55290 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH13P55290 SMG1P5-202ENST00000529428 4219 ntBASIC6.12□□□□□ -1.43
CDH13P55290 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CDH13P55290 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH13P55290 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH13P55290 AC009729.1-201ENST00000548873 1133 ntBASIC6.12□□□□□ -1.43
CDH13P55290 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH13P55290 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CDH13P55290 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 SMG1P2-201ENST00000566127 4221 ntBASIC6.12□□□□□ -1.43
CDH13P55290 AC090651.1-201ENST00000567865 634 ntBASIC6.12□□□□□ -1.43
CDH13P55290 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH13P55290 AC090774.2-201ENST00000584708 322 ntBASIC6.12□□□□□ -1.43
CDH13P55290 NPIPB1P-202ENST00000588786 828 ntBASIC6.12□□□□□ -1.43
CDH13P55290 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH13P55290 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CDH13P55290 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CDH13P55290 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH13P55290 AL162377.2-201ENST00000624532 337 ntBASIC6.12□□□□□ -1.43
CDH13P55290 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH13P55290 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CDH13P55290 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
CDH13P55290 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH13P55290 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CDH13P55290 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH13P55290 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH13P55290 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH13P55290 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH13P55290 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms