Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGCS2P54868 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGCS2P54868 AL157831.2-201ENST00000564681 3095 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 AC139493.1-201ENST00000604368 397 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 AC022467.1-201ENST00000614738 749 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGCS2P54868 AC105235.1-201ENST00000623208 1816 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HMGCS2P54868 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGCS2P54868 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGCS2P54868 AC024587.1-201ENST00000505925 2157 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGCS2P54868 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
HMGCS2P54868 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGCS2P54868 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGCS2P54868 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGCS2P54868 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
HMGCS2P54868 AC130360.2-201ENST00000533477 1556 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGCS2P54868 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HMGCS2P54868 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGCS2P54868 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGCS2P54868 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGCS2P54868 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HMGCS2P54868 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGCS2P54868 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HMGCS2P54868 U3.25-201ENST00000391209 220 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
HMGCS2P54868 AC064862.4-201ENST00000442180 334 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 AL445466.1-201ENST00000448432 357 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGCS2P54868 AL445665.1-202ENST00000452436 324 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGCS2P54868 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGCS2P54868 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGCS2P54868 AC090022.1-201ENST00000546569 311 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGCS2P54868 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.13□□□□□ -1.27
HMGCS2P54868 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGCS2P54868 MIR4776-2-201ENST00000580204 80 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.13□□□□□ -1.27
HMGCS2P54868 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.13□□□□□ -1.27
HMGCS2P54868 RNA5SP440-201ENST00000612665 119 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGCS2P54868 AL049767.1-202ENST00000637826 242 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGCS2P54868 AC025809.2-201ENST00000625085 1802 ntBASIC7.13□□□□□ -1.27
HMGCS2P54868 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGCS2P54868 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HMGCS2P54868 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGCS2P54868 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HMGCS2P54868 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 AC106872.5-201ENST00000508856 1416 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 CASC19-205ENST00000641013 1411 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 AL591848.4-201ENST00000567832 3472 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 NEPNP-201ENST00000404786 1371 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HMGCS2P54868 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 FUNDC2P3-201ENST00000334716 533 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.12□□□□□ -1.27
HMGCS2P54868 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 RN7SKP161-201ENST00000411110 305 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 UBE2V1P14-201ENST00000415815 558 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 RPS14P4-201ENST00000415880 418 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 AC245884.2-201ENST00000426257 404 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 LYPLA1P1-201ENST00000434514 622 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 AP000281.1-201ENST00000444036 316 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGCS2P54868 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGCS2P54868 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGCS2P54868 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.12□□□□□ -1.27
HMGCS2P54868 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGCS2P54868 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGCS2P54868 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGCS2P54868 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms