Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 IGKV2-19-201ENST00000518132 283 ntBASIC7.52□□□□□ -1.2
NUP98P52948 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.52□□□□□ -1.2
NUP98P52948 AC079600.1-201ENST00000550326 297 ntBASIC7.52□□□□□ -1.2
NUP98P52948 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.52□□□□□ -1.2
NUP98P52948 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
NUP98P52948 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NUP98P52948 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NUP98P52948 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
NUP98P52948 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NUP98P52948 AC016583.1-201ENST00000624221 2431 ntBASIC7.52□□□□□ -1.21
NUP98P52948 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.52□□□□□ -1.21
NUP98P52948 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
NUP98P52948 FO393409.1-201ENST00000399325 1372 ntBASIC7.52□□□□□ -1.21
NUP98P52948 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NUP98P52948 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC7.52□□□□□ -1.21
NUP98P52948 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.52□□□□□ -1.21
NUP98P52948 WDR95P-201ENST00000425638 1542 ntBASIC7.52□□□□□ -1.21
NUP98P52948 SNRPEP6-201ENST00000407465 277 ntBASIC7.52□□□□□ -1.21
NUP98P52948 FMO7P-201ENST00000436045 768 ntBASIC7.52□□□□□ -1.21
NUP98P52948 AL663074.2-201ENST00000440621 479 ntBASIC7.52□□□□□ -1.21
NUP98P52948 CUBNP2-201ENST00000443534 1139 ntBASIC7.52□□□□□ -1.21
NUP98P52948 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.52□□□□□ -1.21
NUP98P52948 OR13K1P-201ENST00000444577 975 ntBASIC7.52□□□□□ -1.21
NUP98P52948 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.52□□□□□ -1.21
NUP98P52948 RN7SL515P-201ENST00000463999 297 ntBASIC7.52□□□□□ -1.21
NUP98P52948 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.52□□□□□ -1.21
NUP98P52948 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.52□□□□□ -1.21
NUP98P52948 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.52□□□□□ -1.21
NUP98P52948 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.52□□□□□ -1.21
NUP98P52948 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
NUP98P52948 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NUP98P52948 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NUP98P52948 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.51□□□□□ -1.21
NUP98P52948 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NUP98P52948 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
NUP98P52948 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NUP98P52948 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.51□□□□□ -1.21
NUP98P52948 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.51□□□□□ -1.21
NUP98P52948 TUBB4BP6-201ENST00000437576 479 ntBASIC7.51□□□□□ -1.21
NUP98P52948 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.51□□□□□ -1.21
NUP98P52948 AC112187.1-201ENST00000455837 479 ntBASIC7.51□□□□□ -1.21
NUP98P52948 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
NUP98P52948 OR7E158P-201ENST00000524483 910 ntBASIC7.51□□□□□ -1.21
NUP98P52948 AP004607.6-201ENST00000525033 1202 ntBASIC7.51□□□□□ -1.21
NUP98P52948 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.51□□□□□ -1.21
NUP98P52948 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.51□□□□□ -1.21
NUP98P52948 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.51□□□□□ -1.21
NUP98P52948 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.51□□□□□ -1.21
NUP98P52948 AC145423.1-201ENST00000605712 336 ntBASIC7.51□□□□□ -1.21
NUP98P52948 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.51□□□□□ -1.21
NUP98P52948 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
NUP98P52948 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NUP98P52948 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NUP98P52948 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.5□□□□□ -1.21
NUP98P52948 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NUP98P52948 AC027279.4-201ENST00000624371 2072 ntBASIC7.5□□□□□ -1.21
NUP98P52948 FAM32BP-201ENST00000344033 333 ntBASIC7.5□□□□□ -1.21
NUP98P52948 RN7SKP128-201ENST00000364270 303 ntBASIC7.5□□□□□ -1.21
NUP98P52948 RNU6-171P-201ENST00000384354 107 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AL513325.1-201ENST00000417716 1034 ntBASIC7.5□□□□□ -1.21
NUP98P52948 RPS12P17-201ENST00000438591 377 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.5□□□□□ -1.21
NUP98P52948 AL022237.1-201ENST00000446663 358 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AC026254.2-201ENST00000475295 371 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.5□□□□□ -1.21
NUP98P52948 CYCSP22-201ENST00000517555 339 ntBASIC7.5□□□□□ -1.21
NUP98P52948 TMEM97P2-201ENST00000517841 403 ntBASIC7.5□□□□□ -1.21
NUP98P52948 WBP1LP3-201ENST00000523033 208 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.5□□□□□ -1.21
NUP98P52948 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.5□□□□□ -1.21
NUP98P52948 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.5□□□□□ -1.21
NUP98P52948 TXNP4-201ENST00000575018 310 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.5□□□□□ -1.21
NUP98P52948 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.5□□□□□ -1.21
NUP98P52948 AC130448.2-201ENST00000624082 374 ntBASIC7.5□□□□□ -1.21
NUP98P52948 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.5□□□□□ -1.21
NUP98P52948 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.5□□□□□ -1.21
NUP98P52948 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.5□□□□□ -1.21
NUP98P52948 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.5□□□□□ -1.21
NUP98P52948 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms