Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC8.62□□□□□ -1.03
MSH6P52701 MORF4L1P4-201ENST00000450245 976 ntBASIC8.62□□□□□ -1.03
MSH6P52701 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.62□□□□□ -1.03
MSH6P52701 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.62□□□□□ -1.03
MSH6P52701 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.62□□□□□ -1.03
MSH6P52701 AC106800.3-201ENST00000511389 308 ntBASIC8.62□□□□□ -1.03
MSH6P52701 BX510359.5-201ENST00000515651 304 ntBASIC8.62□□□□□ -1.03
MSH6P52701 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.62□□□□□ -1.03
MSH6P52701 AL445670.1-201ENST00000618889 801 ntBASIC8.62□□□□□ -1.03
MSH6P52701 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC8.62□□□□□ -1.03
MSH6P52701 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.62□□□□□ -1.03
MSH6P52701 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MSH6P52701 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MSH6P52701 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.62□□□□□ -1.03
MSH6P52701 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MSH6P52701 AC011455.2-201ENST00000599320 3336 ntBASIC8.62□□□□□ -1.03
MSH6P52701 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MSH6P52701 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
MSH6P52701 AL139384.2-201ENST00000613809 3590 ntBASIC8.62□□□□□ -1.03
MSH6P52701 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MSH6P52701 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MSH6P52701 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC8.61□□□□□ -1.03
MSH6P52701 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
MSH6P52701 BMS1P17-202ENST00000416720 316 ntBASIC8.61□□□□□ -1.03
MSH6P52701 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.61□□□□□ -1.03
MSH6P52701 AC138866.2-201ENST00000508650 584 ntBASIC8.61□□□□□ -1.03
MSH6P52701 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.61□□□□□ -1.03
MSH6P52701 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.61□□□□□ -1.03
MSH6P52701 IGKV1D-22-201ENST00000518953 324 ntBASIC8.61□□□□□ -1.03
MSH6P52701 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.61□□□□□ -1.03
MSH6P52701 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.61□□□□□ -1.03
MSH6P52701 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.61□□□□□ -1.03
MSH6P52701 AL645933.2-201ENST00000606743 1207 ntBASIC8.61□□□□□ -1.03
MSH6P52701 AL445649.1-201ENST00000615941 691 ntBASIC8.61□□□□□ -1.03
MSH6P52701 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
MSH6P52701 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
MSH6P52701 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 AP002364.1-201ENST00000623330 3386 ntBASIC8.61□□□□□ -1.03
MSH6P52701 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.61□□□□□ -1.03
MSH6P52701 OFD1P17-201ENST00000437639 3018 ntBASIC8.61□□□□□ -1.03
MSH6P52701 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 AC092111.1-201ENST00000618256 3358 ntBASIC8.61□□□□□ -1.03
MSH6P52701 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.61□□□□□ -1.03
MSH6P52701 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MSH6P52701 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
MSH6P52701 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
MSH6P52701 RN7SKP115-201ENST00000363177 317 ntBASIC8.61□□□□□ -1.03
MSH6P52701 RNA5SP500-201ENST00000364486 119 ntBASIC8.61□□□□□ -1.03
MSH6P52701 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
MSH6P52701 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC8.61□□□□□ -1.03
MSH6P52701 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC8.61□□□□□ -1.03
MSH6P52701 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 MORF4-201ENST00000447135 971 ntBASIC8.61□□□□□ -1.03
MSH6P52701 AC011225.1-201ENST00000457751 369 ntBASIC8.61□□□□□ -1.03
MSH6P52701 RN7SL329P-201ENST00000467740 299 ntBASIC8.61□□□□□ -1.03
MSH6P52701 AC093763.2-201ENST00000505334 1223 ntBASIC8.61□□□□□ -1.03
MSH6P52701 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC8.61□□□□□ -1.03
MSH6P52701 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC8.61□□□□□ -1.03
MSH6P52701 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
MSH6P52701 AL356801.1-201ENST00000559320 294 ntBASIC8.61□□□□□ -1.03
MSH6P52701 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
MSH6P52701 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC8.61□□□□□ -1.03
MSH6P52701 AC015802.2-201ENST00000589690 189 ntBASIC8.61□□□□□ -1.03
MSH6P52701 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8.6□□□□□ -1.03
MSH6P52701 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.6□□□□□ -1.03
MSH6P52701 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.6□□□□□ -1.03
MSH6P52701 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.6□□□□□ -1.03
MSH6P52701 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC8.6□□□□□ -1.03
MSH6P52701 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.6□□□□□ -1.03
MSH6P52701 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.6□□□□□ -1.03
MSH6P52701 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MSH6P52701 DUTP4-201ENST00000424782 475 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms