Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 BRAFP1-201ENST00000445336 2703 ntBASIC6.61□□□□□ -1.35
LHX1P48742 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
LHX1P48742 EIF3EP1-201ENST00000433978 1316 ntBASIC6.61□□□□□ -1.35
LHX1P48742 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.61□□□□□ -1.35
LHX1P48742 RN7SKP77-201ENST00000363261 353 ntBASIC6.61□□□□□ -1.35
LHX1P48742 RNA5SP433-201ENST00000364491 114 ntBASIC6.61□□□□□ -1.35
LHX1P48742 SNORA43.1-201ENST00000364863 140 ntBASIC6.61□□□□□ -1.35
LHX1P48742 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 RNA5SP156-201ENST00000410250 110 ntBASIC6.61□□□□□ -1.35
LHX1P48742 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 AC002553.3-201ENST00000453002 341 ntBASIC6.61□□□□□ -1.35
LHX1P48742 Z83838.1-202ENST00000456225 839 ntBASIC6.61□□□□□ -1.35
LHX1P48742 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.61□□□□□ -1.35
LHX1P48742 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 PRMT5P1-201ENST00000514351 598 ntBASIC6.61□□□□□ -1.35
LHX1P48742 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 AP005639.1-201ENST00000526939 192 ntBASIC6.61□□□□□ -1.35
LHX1P48742 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 AC007346.1-201ENST00000569208 867 ntBASIC6.61□□□□□ -1.35
LHX1P48742 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.61□□□□□ -1.35
LHX1P48742 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.61□□□□□ -1.35
LHX1P48742 AC022106.1-201ENST00000612834 766 ntBASIC6.61□□□□□ -1.35
LHX1P48742 AL512356.3-201ENST00000623005 461 ntBASIC6.61□□□□□ -1.35
LHX1P48742 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 AC022726.2-201ENST00000634673 547 ntBASIC6.61□□□□□ -1.35
LHX1P48742 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
LHX1P48742 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 AC110373.1-201ENST00000505994 3505 ntBASIC6.61□□□□□ -1.35
LHX1P48742 AC011416.1-201ENST00000514947 1732 ntBASIC6.61□□□□□ -1.35
LHX1P48742 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.61□□□□□ -1.35
LHX1P48742 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.6□□□□□ -1.35
LHX1P48742 AC018717.1-201ENST00000457712 1505 ntBASIC6.6□□□□□ -1.35
LHX1P48742 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
LHX1P48742 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LHX1P48742 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
LHX1P48742 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LHX1P48742 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LHX1P48742 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LHX1P48742 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
LHX1P48742 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
LHX1P48742 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.6□□□□□ -1.35
LHX1P48742 COX6B1P3-201ENST00000312310 260 ntBASIC6.6□□□□□ -1.35
LHX1P48742 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
LHX1P48742 RNA5SP110-201ENST00000362638 115 ntBASIC6.6□□□□□ -1.35
LHX1P48742 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
LHX1P48742 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.6□□□□□ -1.35
LHX1P48742 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.6□□□□□ -1.35
LHX1P48742 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.6□□□□□ -1.35
LHX1P48742 AL138899.2-201ENST00000439139 499 ntBASIC6.6□□□□□ -1.35
LHX1P48742 AMYP1-201ENST00000440059 1023 ntBASIC6.6□□□□□ -1.35
LHX1P48742 PCNPP2-201ENST00000441651 455 ntBASIC6.6□□□□□ -1.35
LHX1P48742 AC009237.1-201ENST00000442127 744 ntBASIC6.6□□□□□ -1.35
LHX1P48742 GAPDHP23-201ENST00000444823 993 ntBASIC6.6□□□□□ -1.35
LHX1P48742 RBBP4P1-201ENST00000502424 1276 ntBASIC6.6□□□□□ -1.35
LHX1P48742 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.6□□□□□ -1.35
LHX1P48742 RNA5SP434-201ENST00000516647 121 ntBASIC6.6□□□□□ -1.35
LHX1P48742 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.6□□□□□ -1.35
LHX1P48742 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.6□□□□□ -1.35
LHX1P48742 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.6□□□□□ -1.35
LHX1P48742 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LHX1P48742 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.6□□□□□ -1.35
LHX1P48742 AC079315.1-201ENST00000602952 623 ntBASIC6.6□□□□□ -1.35
LHX1P48742 AC024589.2-201ENST00000605642 1294 ntBASIC6.6□□□□□ -1.35
LHX1P48742 AC092266.1-201ENST00000610958 165 ntBASIC6.6□□□□□ -1.35
LHX1P48742 MIR6071-201ENST00000616741 78 ntBASIC6.6□□□□□ -1.35
LHX1P48742 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.6□□□□□ -1.35
LHX1P48742 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
LHX1P48742 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.6□□□□□ -1.35
LHX1P48742 RAD17P2-201ENST00000451754 1977 ntBASIC6.6□□□□□ -1.35
LHX1P48742 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
LHX1P48742 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LHX1P48742 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.59□□□□□ -1.35
LHX1P48742 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.59□□□□□ -1.35
LHX1P48742 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LHX1P48742 AC011815.2-201ENST00000618230 2021 ntBASIC6.59□□□□□ -1.35
LHX1P48742 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.59□□□□□ -1.35
LHX1P48742 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
LHX1P48742 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.59□□□□□ -1.35
LHX1P48742 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.59□□□□□ -1.35
LHX1P48742 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
LHX1P48742 SNORA51.9-201ENST00000384295 124 ntBASIC6.59□□□□□ -1.35
LHX1P48742 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms