Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC6.47□□□□□ -1.37
HTTP42858 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HTTP42858 AL359091.1-201ENST00000449048 1734 ntBASIC6.47□□□□□ -1.37
HTTP42858 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.47□□□□□ -1.37
HTTP42858 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
HTTP42858 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
HTTP42858 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
HTTP42858 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
HTTP42858 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HTTP42858 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HTTP42858 AL035419.1-201ENST00000397037 564 ntBASIC6.46□□□□□ -1.37
HTTP42858 RPL23AP18-201ENST00000416139 468 ntBASIC6.46□□□□□ -1.37
HTTP42858 AL161722.1-201ENST00000446972 1032 ntBASIC6.46□□□□□ -1.37
HTTP42858 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.46□□□□□ -1.37
HTTP42858 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC6.46□□□□□ -1.37
HTTP42858 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.46□□□□□ -1.37
HTTP42858 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HTTP42858 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HTTP42858 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HTTP42858 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HTTP42858 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HTTP42858 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HTTP42858 AC005294.1-201ENST00000355509 281 ntBASIC6.46□□□□□ -1.38
HTTP42858 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HTTP42858 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 AC104837.2-201ENST00000427236 424 ntBASIC6.46□□□□□ -1.38
HTTP42858 RPL31P44-201ENST00000447680 377 ntBASIC6.46□□□□□ -1.38
HTTP42858 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 RPL7P45-201ENST00000455851 743 ntBASIC6.46□□□□□ -1.38
HTTP42858 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.46□□□□□ -1.38
HTTP42858 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 AC008745.1-201ENST00000604064 271 ntBASIC6.46□□□□□ -1.38
HTTP42858 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.46□□□□□ -1.38
HTTP42858 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.46□□□□□ -1.38
HTTP42858 HSPA8P18-201ENST00000439846 1928 ntBASIC6.46□□□□□ -1.38
HTTP42858 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HTTP42858 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HTTP42858 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HTTP42858 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HTTP42858 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.45□□□□□ -1.38
HTTP42858 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 AC018809.2-201ENST00000602436 3823 ntBASIC6.45□□□□□ -1.38
HTTP42858 AC009163.6-201ENST00000612367 342 ntBASIC6.45□□□□□ -1.38
HTTP42858 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
HTTP42858 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.45□□□□□ -1.38
HTTP42858 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
HTTP42858 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC6.45□□□□□ -1.38
HTTP42858 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 Y_RNA.126-201ENST00000363382 111 ntBASIC6.45□□□□□ -1.38
HTTP42858 RNA5SP478-201ENST00000364657 115 ntBASIC6.45□□□□□ -1.38
HTTP42858 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.45□□□□□ -1.38
HTTP42858 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 AC015983.1-201ENST00000441577 373 ntBASIC6.45□□□□□ -1.38
HTTP42858 MTCYBP21-201ENST00000443300 1113 ntBASIC6.45□□□□□ -1.38
HTTP42858 AC004129.2-201ENST00000457229 287 ntBASIC6.45□□□□□ -1.38
HTTP42858 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.45□□□□□ -1.38
HTTP42858 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.45□□□□□ -1.38
HTTP42858 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.45□□□□□ -1.38
HTTP42858 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.45□□□□□ -1.38
HTTP42858 BLZF2P-201ENST00000553776 1130 ntBASIC6.45□□□□□ -1.38
HTTP42858 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 AC020910.2-201ENST00000603635 610 ntBASIC6.45□□□□□ -1.38
HTTP42858 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.45□□□□□ -1.38
HTTP42858 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.45□□□□□ -1.38
HTTP42858 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.45□□□□□ -1.38
HTTP42858 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HTTP42858 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HTTP42858 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HTTP42858 AC011933.2-201ENST00000578539 2790 ntBASIC6.45□□□□□ -1.38
HTTP42858 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms