Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.08□□□□□ -1.28
CIITAP33076 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.08□□□□□ -1.28
CIITAP33076 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
CIITAP33076 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 RN7SKP237-201ENST00000364663 301 ntBASIC7.07□□□□□ -1.28
CIITAP33076 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.07□□□□□ -1.28
CIITAP33076 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.07□□□□□ -1.28
CIITAP33076 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.07□□□□□ -1.28
CIITAP33076 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.07□□□□□ -1.28
CIITAP33076 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.07□□□□□ -1.28
CIITAP33076 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.07□□□□□ -1.28
CIITAP33076 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.07□□□□□ -1.28
CIITAP33076 OR52E7P-201ENST00000452394 933 ntBASIC7.07□□□□□ -1.28
CIITAP33076 AC019084.1-201ENST00000457337 432 ntBASIC7.07□□□□□ -1.28
CIITAP33076 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 AC090958.1-201ENST00000511122 351 ntBASIC7.07□□□□□ -1.28
CIITAP33076 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.07□□□□□ -1.28
CIITAP33076 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.07□□□□□ -1.28
CIITAP33076 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.07□□□□□ -1.28
CIITAP33076 AL845552.1-201ENST00000556820 323 ntBASIC7.07□□□□□ -1.28
CIITAP33076 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.07□□□□□ -1.28
CIITAP33076 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 AC073389.3-201ENST00000609434 935 ntBASIC7.07□□□□□ -1.28
CIITAP33076 AL118556.2-201ENST00000614375 824 ntBASIC7.07□□□□□ -1.28
CIITAP33076 AL512356.3-201ENST00000623005 461 ntBASIC7.07□□□□□ -1.28
CIITAP33076 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.07□□□□□ -1.28
CIITAP33076 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.07□□□□□ -1.28
CIITAP33076 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.07□□□□□ -1.28
CIITAP33076 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CIITAP33076 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CIITAP33076 AC008957.3-201ENST00000624112 2242 ntBASIC7.07□□□□□ -1.28
CIITAP33076 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.06□□□□□ -1.28
CIITAP33076 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
CIITAP33076 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.06□□□□□ -1.28
CIITAP33076 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
CIITAP33076 AL591848.4-201ENST00000567832 3472 ntBASIC7.06□□□□□ -1.28
CIITAP33076 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CIITAP33076 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CIITAP33076 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CIITAP33076 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CIITAP33076 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.06□□□□□ -1.28
CIITAP33076 MIR433-201ENST00000384837 93 ntBASIC7.06□□□□□ -1.28
CIITAP33076 GCNT1P4-201ENST00000404096 329 ntBASIC7.06□□□□□ -1.28
CIITAP33076 RNA5SP431-201ENST00000410312 120 ntBASIC7.06□□□□□ -1.28
CIITAP33076 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.06□□□□□ -1.28
CIITAP33076 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.06□□□□□ -1.28
CIITAP33076 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.06□□□□□ -1.28
CIITAP33076 AC016908.1-201ENST00000442571 1219 ntBASIC7.06□□□□□ -1.28
CIITAP33076 OR13K1P-201ENST00000444577 975 ntBASIC7.06□□□□□ -1.28
CIITAP33076 AL022237.1-201ENST00000446663 358 ntBASIC7.06□□□□□ -1.28
CIITAP33076 RPS27AP3-201ENST00000453803 454 ntBASIC7.06□□□□□ -1.28
CIITAP33076 AP002453.1-201ENST00000492327 668 ntBASIC7.06□□□□□ -1.28
CIITAP33076 RPL37P23-201ENST00000492641 294 ntBASIC7.06□□□□□ -1.28
CIITAP33076 AC023818.1-201ENST00000498379 384 ntBASIC7.06□□□□□ -1.28
CIITAP33076 MAST4-IT1-201ENST00000514241 658 ntBASIC7.06□□□□□ -1.28
CIITAP33076 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.06□□□□□ -1.28
CIITAP33076 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC7.06□□□□□ -1.28
CIITAP33076 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.06□□□□□ -1.28
CIITAP33076 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.06□□□□□ -1.28
CIITAP33076 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.06□□□□□ -1.28
CIITAP33076 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.06□□□□□ -1.28
CIITAP33076 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.06□□□□□ -1.28
CIITAP33076 MIR4502-201ENST00000580432 81 ntBASIC7.06□□□□□ -1.28
CIITAP33076 SETP3-201ENST00000581726 813 ntBASIC7.06□□□□□ -1.28
CIITAP33076 MIR4271-201ENST00000582451 67 ntBASIC7.06□□□□□ -1.28
CIITAP33076 NPIPB1P-202ENST00000588786 828 ntBASIC7.06□□□□□ -1.28
CIITAP33076 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.06□□□□□ -1.28
CIITAP33076 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.06□□□□□ -1.28
CIITAP33076 AL683813.2-201ENST00000605245 502 ntBASIC7.06□□□□□ -1.28
CIITAP33076 AC097641.3-201ENST00000613523 464 ntBASIC7.06□□□□□ -1.28
CIITAP33076 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC7.06□□□□□ -1.28
CIITAP33076 AL354950.1-201ENST00000614150 568 ntBASIC7.06□□□□□ -1.28
CIITAP33076 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.06□□□□□ -1.28
CIITAP33076 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CIITAP33076 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CIITAP33076 AC011369.2-201ENST00000624423 1567 ntBASIC7.06□□□□□ -1.28
CIITAP33076 AC011416.1-201ENST00000514947 1732 ntBASIC7.06□□□□□ -1.28
CIITAP33076 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CIITAP33076 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CIITAP33076 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
CIITAP33076 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CIITAP33076 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms