Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.87□□□□□ -1.47
SDC1P18827 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.87□□□□□ -1.47
SDC1P18827 NR1H5P-201ENST00000452683 1377 ntBASIC5.87□□□□□ -1.47
SDC1P18827 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
SDC1P18827 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.87□□□□□ -1.47
SDC1P18827 AC024651.2-201ENST00000562480 2098 ntBASIC5.87□□□□□ -1.47
SDC1P18827 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SDC1P18827 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.87□□□□□ -1.47
SDC1P18827 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SDC1P18827 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
SDC1P18827 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.86□□□□□ -1.47
SDC1P18827 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SDC1P18827 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SDC1P18827 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SDC1P18827 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SDC1P18827 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.86□□□□□ -1.47
SDC1P18827 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.86□□□□□ -1.47
SDC1P18827 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.86□□□□□ -1.47
SDC1P18827 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SDC1P18827 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.86□□□□□ -1.47
SDC1P18827 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SDC1P18827 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SDC1P18827 RNA5SP77-201ENST00000365394 120 ntBASIC5.86□□□□□ -1.47
SDC1P18827 GNG5P2-201ENST00000372054 207 ntBASIC5.86□□□□□ -1.47
SDC1P18827 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.86□□□□□ -1.47
SDC1P18827 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.86□□□□□ -1.47
SDC1P18827 AC245884.2-201ENST00000426257 404 ntBASIC5.86□□□□□ -1.47
SDC1P18827 RPL34P27-201ENST00000428810 349 ntBASIC5.86□□□□□ -1.47
SDC1P18827 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SDC1P18827 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SDC1P18827 IGLV3-4-201ENST00000432300 244 ntBASIC5.86□□□□□ -1.47
SDC1P18827 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 AC094019.1-201ENST00000434678 472 ntBASIC5.86□□□□□ -1.47
SDC1P18827 POU5F1P5-201ENST00000445059 658 ntBASIC5.86□□□□□ -1.47
SDC1P18827 AL445991.1-201ENST00000450381 475 ntBASIC5.86□□□□□ -1.47
SDC1P18827 RAB28P2-201ENST00000454299 641 ntBASIC5.86□□□□□ -1.47
SDC1P18827 RARRES2P3-201ENST00000457739 473 ntBASIC5.86□□□□□ -1.47
SDC1P18827 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SDC1P18827 AC018639.1-201ENST00000492994 442 ntBASIC5.86□□□□□ -1.47
SDC1P18827 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.86□□□□□ -1.47
SDC1P18827 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.86□□□□□ -1.47
SDC1P18827 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 MIR212-201ENST00000586026 110 ntBASIC5.86□□□□□ -1.47
SDC1P18827 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.86□□□□□ -1.47
SDC1P18827 AC008555.7-201ENST00000605008 583 ntBASIC5.86□□□□□ -1.47
SDC1P18827 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.86□□□□□ -1.47
SDC1P18827 MIR6885-201ENST00000612241 66 ntBASIC5.86□□□□□ -1.47
SDC1P18827 MIR6811-201ENST00000620409 58 ntBASIC5.86□□□□□ -1.47
SDC1P18827 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SDC1P18827 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SDC1P18827 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SDC1P18827 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.86□□□□□ -1.47
SDC1P18827 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SDC1P18827 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.85□□□□□ -1.47
SDC1P18827 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SDC1P18827 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.85□□□□□ -1.47
SDC1P18827 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SDC1P18827 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SDC1P18827 AL161901.1-201ENST00000624954 3425 ntBASIC5.85□□□□□ -1.47
SDC1P18827 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SDC1P18827 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SDC1P18827 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SDC1P18827 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SDC1P18827 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.85□□□□□ -1.47
SDC1P18827 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SDC1P18827 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SDC1P18827 RNA5SP514-201ENST00000363717 111 ntBASIC5.85□□□□□ -1.47
SDC1P18827 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SDC1P18827 YWHAZP4-201ENST00000392459 708 ntBASIC5.85□□□□□ -1.47
SDC1P18827 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.85□□□□□ -1.47
SDC1P18827 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.85□□□□□ -1.47
SDC1P18827 MTND2P12-201ENST00000417560 1252 ntBASIC5.85□□□□□ -1.47
SDC1P18827 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 AL365220.1-201ENST00000432923 399 ntBASIC5.85□□□□□ -1.47
SDC1P18827 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 LDHAP2-201ENST00000437325 985 ntBASIC5.85□□□□□ -1.47
SDC1P18827 ARMC4P1-201ENST00000438905 707 ntBASIC5.85□□□□□ -1.47
SDC1P18827 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.85□□□□□ -1.47
SDC1P18827 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SDC1P18827 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.85□□□□□ -1.47
SDC1P18827 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 HIGD1AP16-201ENST00000450986 258 ntBASIC5.85□□□□□ -1.47
SDC1P18827 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.85□□□□□ -1.47
SDC1P18827 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.85□□□□□ -1.47
SDC1P18827 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.85□□□□□ -1.47
SDC1P18827 RN7SL104P-201ENST00000498686 293 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms