Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 RNU11-6P-201ENST00000391127 133 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC4.98□□□□□ -1.61
DEFA4P12838 AC083862.1-201ENST00000427378 1242 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 GTF3AP6-201ENST00000432585 986 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 EMC3-AS1-205ENST00000438698 534 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 HMGN1P32-201ENST00000441744 256 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 GAPDHP37-201ENST00000442317 968 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.98□□□□□ -1.61
DEFA4P12838 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.98□□□□□ -1.61
DEFA4P12838 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
DEFA4P12838 RN7SL83P-201ENST00000468131 297 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.98□□□□□ -1.61
DEFA4P12838 AC015524.1-201ENST00000491585 472 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.98□□□□□ -1.61
DEFA4P12838 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.98□□□□□ -1.61
DEFA4P12838 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 RNA5SP418-201ENST00000515951 117 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
DEFA4P12838 HNRNPCP1-201ENST00000556181 766 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 RN7SL66P-201ENST00000582099 264 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.98□□□□□ -1.61
DEFA4P12838 AL589863.1-201ENST00000595383 631 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.98□□□□□ -1.61
DEFA4P12838 OR7E91P-202ENST00000642062 1198 ntBASIC4.98□□□□□ -1.61
DEFA4P12838 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
DEFA4P12838 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
DEFA4P12838 AC005005.4-201ENST00000623789 16698 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 AP001541.1-201ENST00000623322 1904 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.97□□□□□ -1.61
DEFA4P12838 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
DEFA4P12838 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
DEFA4P12838 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
DEFA4P12838 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.97□□□□□ -1.61
DEFA4P12838 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 AC217777.1-201ENST00000570034 1471 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.97□□□□□ -1.61
DEFA4P12838 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
DEFA4P12838 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.97□□□□□ -1.61
DEFA4P12838 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.97□□□□□ -1.61
DEFA4P12838 AC017035.1-201ENST00000411999 1115 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 AC015977.1-201ENST00000418887 292 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 AL360013.1-201ENST00000419031 858 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.97□□□□□ -1.61
DEFA4P12838 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.97□□□□□ -1.61
DEFA4P12838 AL031681.1-201ENST00000443304 400 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC4.97□□□□□ -1.61
DEFA4P12838 RANP2-201ENST00000456833 229 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
DEFA4P12838 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.97□□□□□ -1.61
DEFA4P12838 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.97□□□□□ -1.61
DEFA4P12838 AC093664.1-201ENST00000511779 289 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.97□□□□□ -1.61
DEFA4P12838 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.97□□□□□ -1.61
DEFA4P12838 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.97□□□□□ -1.61
DEFA4P12838 CYCSP25-201ENST00000525280 316 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC4.97□□□□□ -1.61
DEFA4P12838 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.97□□□□□ -1.61
DEFA4P12838 HMGN1P26-201ENST00000558737 303 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 AC090651.1-201ENST00000567865 634 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 PPIAP14-201ENST00000577627 496 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.97□□□□□ -1.61
DEFA4P12838 MIR212-201ENST00000586026 110 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.97□□□□□ -1.61
DEFA4P12838 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.97□□□□□ -1.61
DEFA4P12838 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.97□□□□□ -1.61
DEFA4P12838 U91328.4-201ENST00000608919 517 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.97□□□□□ -1.61
DEFA4P12838 AL352984.2-201ENST00000611153 546 ntBASIC4.97□□□□□ -1.61
DEFA4P12838 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.97□□□□□ -1.61
DEFA4P12838 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
DEFA4P12838 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEFA4P12838 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms