Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 AC092944.2-201ENST00000605443 889 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 AC015712.7-201ENST00000615211 635 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL1P09341 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CXCL1P09341 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 AC068870.3-201ENST00000625077 2536 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 AC024587.1-201ENST00000505925 2157 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 RBPJP6-201ENST00000411556 1431 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 AL591135.1-201ENST00000401578 5914 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CXCL1P09341 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CXCL1P09341 RN7SKP128-201ENST00000364270 303 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AC087752.1-201ENST00000391360 558 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 PDCL3P5-201ENST00000398028 722 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AL391419.1-201ENST00000398901 1275 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL1P09341 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.72□□□□□ -1.65
CXCL1P09341 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 ETF1P1-206ENST00000427296 984 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL1P09341 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CXCL1P09341 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL1P09341 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.72□□□□□ -1.65
CXCL1P09341 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 AC073594.1-201ENST00000462065 364 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.72□□□□□ -1.65
CXCL1P09341 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
CXCL1P09341 RN7SL445P-201ENST00000495609 293 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL1P09341 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CXCL1P09341 AC090958.1-201ENST00000511122 351 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 TMEM97P2-201ENST00000517841 403 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 CARSP2-201ENST00000520688 277 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.72□□□□□ -1.65
CXCL1P09341 OR4C1P-201ENST00000530880 937 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 SETP17-201ENST00000534163 817 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
CXCL1P09341 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL1P09341 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.72□□□□□ -1.65
CXCL1P09341 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 MIR5705-201ENST00000579870 89 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.72□□□□□ -1.65
CXCL1P09341 AC008507.3-201ENST00000585753 472 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 COX6CP7-201ENST00000597056 208 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL1P09341 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC4.72□□□□□ -1.65
CXCL1P09341 FAM72A-208ENST00000607379 1139 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AC018690.1-201ENST00000608144 626 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL1P09341 MRPL57P3-201ENST00000619218 176 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AC006328.2-201ENST00000623198 397 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 AC005753.1-201ENST00000623837 618 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 AC012005.2-201ENST00000624333 397 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.72□□□□□ -1.65
CXCL1P09341 LRRC37A15P-201ENST00000514785 1355 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CXCL1P09341 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.72□□□□□ -1.65
CXCL1P09341 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
CXCL1P09341 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL1P09341 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL1P09341 PSMC1P4-201ENST00000515236 1327 ntBASIC4.72□□□□□ -1.65
CXCL1P09341 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.71□□□□□ -1.65
CXCL1P09341 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CXCL1P09341 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CXCL1P09341 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CXCL1P09341 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms