Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.78□□□□□ -1.32
RB1P06400 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.78□□□□□ -1.32
RB1P06400 CR788268.1-201ENST00000603931 1809 ntBASIC6.78□□□□□ -1.32
RB1P06400 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
RB1P06400 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.77□□□□□ -1.32
RB1P06400 AC119674.1-204ENST00000641348 1343 ntBASIC6.77□□□□□ -1.32
RB1P06400 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
RB1P06400 OR4G1P-202ENST00000641173 1788 ntBASIC6.77□□□□□ -1.33
RB1P06400 AC092111.1-201ENST00000618256 3358 ntBASIC6.77□□□□□ -1.33
RB1P06400 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.77□□□□□ -1.33
RB1P06400 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 SNORA21-201ENST00000362423 132 ntBASIC6.77□□□□□ -1.33
RB1P06400 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.77□□□□□ -1.33
RB1P06400 RNU6-316P-201ENST00000391027 107 ntBASIC6.77□□□□□ -1.33
RB1P06400 AL096800.1-201ENST00000405326 893 ntBASIC6.77□□□□□ -1.33
RB1P06400 EEF1B2P8-201ENST00000414101 671 ntBASIC6.77□□□□□ -1.33
RB1P06400 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 MARK2P12-201ENST00000420129 585 ntBASIC6.77□□□□□ -1.33
RB1P06400 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.77□□□□□ -1.33
RB1P06400 CYCSP52-201ENST00000422857 310 ntBASIC6.77□□□□□ -1.33
RB1P06400 TPTE2P1-204ENST00000435256 593 ntBASIC6.77□□□□□ -1.33
RB1P06400 AC002553.3-201ENST00000453002 341 ntBASIC6.77□□□□□ -1.33
RB1P06400 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.77□□□□□ -1.33
RB1P06400 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.77□□□□□ -1.33
RB1P06400 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.77□□□□□ -1.33
RB1P06400 AC090958.1-201ENST00000511122 351 ntBASIC6.77□□□□□ -1.33
RB1P06400 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.77□□□□□ -1.33
RB1P06400 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.77□□□□□ -1.33
RB1P06400 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.77□□□□□ -1.33
RB1P06400 AC068305.2-201ENST00000550567 1205 ntBASIC6.77□□□□□ -1.33
RB1P06400 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.77□□□□□ -1.33
RB1P06400 PRELID3BP3-201ENST00000584963 545 ntBASIC6.77□□□□□ -1.33
RB1P06400 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.77□□□□□ -1.33
RB1P06400 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.77□□□□□ -1.33
RB1P06400 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.77□□□□□ -1.33
RB1P06400 AC073333.2-201ENST00000603589 769 ntBASIC6.77□□□□□ -1.33
RB1P06400 FAM72A-208ENST00000607379 1139 ntBASIC6.77□□□□□ -1.33
RB1P06400 AC079414.3-201ENST00000612986 1090 ntBASIC6.77□□□□□ -1.33
RB1P06400 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.77□□□□□ -1.33
RB1P06400 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.77□□□□□ -1.33
RB1P06400 AC132825.8-201ENST00000640783 297 ntBASIC6.77□□□□□ -1.33
RB1P06400 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
RB1P06400 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.77□□□□□ -1.33
RB1P06400 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.77□□□□□ -1.33
RB1P06400 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.77□□□□□ -1.33
RB1P06400 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
RB1P06400 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.77□□□□□ -1.33
RB1P06400 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.77□□□□□ -1.33
RB1P06400 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RB1P06400 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RB1P06400 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RB1P06400 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RB1P06400 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RB1P06400 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RB1P06400 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.76□□□□□ -1.33
RB1P06400 RNA5SP273-201ENST00000362484 113 ntBASIC6.76□□□□□ -1.33
RB1P06400 TRAV35-201ENST00000390462 330 ntBASIC6.76□□□□□ -1.33
RB1P06400 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RB1P06400 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
RB1P06400 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RB1P06400 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.76□□□□□ -1.33
RB1P06400 VPS25P1-201ENST00000455691 508 ntBASIC6.76□□□□□ -1.33
RB1P06400 RPL5P11-201ENST00000498068 893 ntBASIC6.76□□□□□ -1.33
RB1P06400 SUMO2P7-201ENST00000511179 285 ntBASIC6.76□□□□□ -1.33
RB1P06400 RPL7L1P4-201ENST00000513004 707 ntBASIC6.76□□□□□ -1.33
RB1P06400 Y_RNA.667-201ENST00000516212 107 ntBASIC6.76□□□□□ -1.33
RB1P06400 TMEM97P2-201ENST00000517841 403 ntBASIC6.76□□□□□ -1.33
RB1P06400 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.76□□□□□ -1.33
RB1P06400 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RB1P06400 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.76□□□□□ -1.33
RB1P06400 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.76□□□□□ -1.33
RB1P06400 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.76□□□□□ -1.33
RB1P06400 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 AC005393.1-201ENST00000617916 584 ntBASIC6.76□□□□□ -1.33
RB1P06400 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RB1P06400 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 RNF19BPY-201ENST00000458209 1550 ntBASIC6.76□□□□□ -1.33
RB1P06400 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RB1P06400 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.76□□□□□ -1.33
RB1P06400 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.76□□□□□ -1.33
RB1P06400 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.76□□□□□ -1.33
RB1P06400 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms