Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ALDH1A1P00352 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC8.69□□□□□ -1.02
ALDH1A1P00352 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
ALDH1A1P00352 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
ALDH1A1P00352 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 UBE2Q2P1-202ENST00000354771 883 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 SNORA63-201ENST00000363450 132 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 RNU6-1042P-201ENST00000384204 107 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 MIR555-201ENST00000384987 96 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 SNORD115-47-201ENST00000391226 86 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 LDHAP5-201ENST00000394996 622 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 RANP4-201ENST00000413361 655 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 FABP7P1-201ENST00000424004 391 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 AL139158.1-201ENST00000424719 340 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 NDUFA5P4-201ENST00000436704 385 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC015864.1-201ENST00000496512 544 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC114324.2-202ENST00000503812 134 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 Y_RNA.701-201ENST00000516812 110 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC106038.2-201ENST00000520706 568 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 OR9G2P-201ENST00000533326 880 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC090286.3-201ENST00000573133 187 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 MIR5682-201ENST00000584864 76 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 BNIP3P9-201ENST00000603714 553 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC122710.3-201ENST00000606566 541 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 AL132796.3-201ENST00000624703 900 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC233280.20-201ENST00000637412 416 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 OR5H6-203ENST00000642105 978 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 AL365475.1-201ENST00000565135 1949 ntBASIC8.68□□□□□ -1.02
ALDH1A1P00352 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
ALDH1A1P00352 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
ALDH1A1P00352 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ALDH1A1P00352 MAPK10-371ENST00000641952 5209 ntBASIC8.67□□□□□ -1.02
ALDH1A1P00352 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
ALDH1A1P00352 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ALDH1A1P00352 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
ALDH1A1P00352 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ALDH1A1P00352 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ALDH1A1P00352 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
ALDH1A1P00352 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
ALDH1A1P00352 RNU6-1009P-201ENST00000390996 107 ntBASIC8.67□□□□□ -1.02
ALDH1A1P00352 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC8.67□□□□□ -1.02
ALDH1A1P00352 AL133268.1-201ENST00000405676 1401 ntBASIC8.67□□□□□ -1.02
ALDH1A1P00352 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.67□□□□□ -1.02
ALDH1A1P00352 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.67□□□□□ -1.02
ALDH1A1P00352 MIR1266-201ENST00000408125 84 ntBASIC8.67□□□□□ -1.02
ALDH1A1P00352 RPS20P15-201ENST00000412792 311 ntBASIC8.67□□□□□ -1.02
ALDH1A1P00352 AC009237.5-201ENST00000414271 501 ntBASIC8.67□□□□□ -1.02
ALDH1A1P00352 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.67□□□□□ -1.02
ALDH1A1P00352 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC8.67□□□□□ -1.02
ALDH1A1P00352 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC8.67□□□□□ -1.02
ALDH1A1P00352 NEK2P4-201ENST00000425793 1329 ntBASIC8.67□□□□□ -1.02
ALDH1A1P00352 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC8.67□□□□□ -1.02
ALDH1A1P00352 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms