Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 VN1R7P-201ENST00000619242 903 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AC092656.1-203ENST00000624134 423 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.69□□□□□ -1.18
SOX1O00570 OR8G3P-202ENST00000641572 1255 ntBASIC7.69□□□□□ -1.18
SOX1O00570 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 ZNF90P1-201ENST00000480493 1951 ntBASIC7.69□□□□□ -1.18
SOX1O00570 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SOX1O00570 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
SOX1O00570 AL359715.3-201ENST00000569267 2123 ntBASIC7.69□□□□□ -1.18
SOX1O00570 IPO7P2-201ENST00000451446 1750 ntBASIC7.69□□□□□ -1.18
SOX1O00570 EIF4BP5-201ENST00000567338 1795 ntBASIC7.69□□□□□ -1.18
SOX1O00570 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.68□□□□□ -1.18
SOX1O00570 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
SOX1O00570 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC7.68□□□□□ -1.18
SOX1O00570 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.68□□□□□ -1.18
SOX1O00570 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 RPL12P13-201ENST00000310055 497 ntBASIC7.68□□□□□ -1.18
SOX1O00570 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SOX1O00570 RPL12P23-201ENST00000405880 490 ntBASIC7.68□□□□□ -1.18
SOX1O00570 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 MTND1P23-201ENST00000416931 372 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.68□□□□□ -1.18
SOX1O00570 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SOX1O00570 AC006366.1-201ENST00000422002 759 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AC019178.2-201ENST00000423595 505 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AMYP1-201ENST00000440059 1023 ntBASIC7.68□□□□□ -1.18
SOX1O00570 RN7SL390P-201ENST00000470634 284 ntBASIC7.68□□□□□ -1.18
SOX1O00570 SYPL1P1-201ENST00000473622 768 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.68□□□□□ -1.18
SOX1O00570 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.68□□□□□ -1.18
SOX1O00570 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.68□□□□□ -1.18
SOX1O00570 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.68□□□□□ -1.18
SOX1O00570 AC119751.1-201ENST00000513357 765 ntBASIC7.68□□□□□ -1.18
SOX1O00570 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 RNU6-943P-201ENST00000516960 98 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC7.68□□□□□ -1.18
SOX1O00570 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.68□□□□□ -1.18
SOX1O00570 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC7.68□□□□□ -1.18
SOX1O00570 AP000619.2-201ENST00000546014 969 ntBASIC7.68□□□□□ -1.18
SOX1O00570 PPIAP6-201ENST00000557078 499 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AC106734.1-201ENST00000568646 663 ntBASIC7.68□□□□□ -1.18
SOX1O00570 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 RBM22P1-201ENST00000578589 1214 ntBASIC7.68□□□□□ -1.18
SOX1O00570 RN7SL667P-201ENST00000582817 298 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 AC122133.1-201ENST00000613964 233 ntBASIC7.68□□□□□ -1.18
SOX1O00570 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 AL590240.3-201ENST00000621416 943 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AC093648.1-201ENST00000623546 606 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.68□□□□□ -1.18
SOX1O00570 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.68□□□□□ -1.18
SOX1O00570 AC111188.2-201ENST00000529697 1387 ntBASIC7.68□□□□□ -1.18
SOX1O00570 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SOX1O00570 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.68□□□□□ -1.18
SOX1O00570 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SOX1O00570 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.67□□□□□ -1.18
SOX1O00570 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 AC104447.1-201ENST00000624214 2124 ntBASIC7.67□□□□□ -1.18
SOX1O00570 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
SOX1O00570 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 FAM133CP-201ENST00000332869 704 ntBASIC7.67□□□□□ -1.18
SOX1O00570 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SOX1O00570 AL031985.1-201ENST00000392713 418 ntBASIC7.67□□□□□ -1.18
SOX1O00570 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms