Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC073046.2-201ENST00000604756 527 ntBASIC5.23□□□□□ -1.57
SDCBPO00560 AC004890.3-201ENST00000605566 1095 ntBASIC5.23□□□□□ -1.57
SDCBPO00560 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.23□□□□□ -1.57
SDCBPO00560 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SDCBPO00560 MIR7159-201ENST00000620587 66 ntBASIC5.23□□□□□ -1.57
SDCBPO00560 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SDCBPO00560 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.23□□□□□ -1.57
SDCBPO00560 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.23□□□□□ -1.57
SDCBPO00560 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SDCBPO00560 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
SDCBPO00560 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
SDCBPO00560 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.23□□□□□ -1.57
SDCBPO00560 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.23□□□□□ -1.57
SDCBPO00560 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.22□□□□□ -1.57
SDCBPO00560 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.22□□□□□ -1.57
SDCBPO00560 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.22□□□□□ -1.57
SDCBPO00560 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SDCBPO00560 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SDCBPO00560 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 ARSFP1-201ENST00000398758 477 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 UBTFL2-201ENST00000411859 1191 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.22□□□□□ -1.57
SDCBPO00560 AL354707.3-201ENST00000427308 331 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.22□□□□□ -1.57
SDCBPO00560 AL451063.1-201ENST00000450164 1133 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 RANP2-201ENST00000456833 229 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 AP003385.3-201ENST00000472498 287 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 AC128716.1-201ENST00000475129 166 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 RPS4XP17-201ENST00000479057 754 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 AC015524.1-201ENST00000491585 472 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 AC018645.1-201ENST00000505003 109 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.22□□□□□ -1.57
SDCBPO00560 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 RNA5SP418-201ENST00000515951 117 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.22□□□□□ -1.57
SDCBPO00560 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.22□□□□□ -1.57
SDCBPO00560 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 AL133399.1-201ENST00000527476 298 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SDCBPO00560 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.22□□□□□ -1.57
SDCBPO00560 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.22□□□□□ -1.57
SDCBPO00560 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SDCBPO00560 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SDCBPO00560 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.22□□□□□ -1.57
SDCBPO00560 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SDCBPO00560 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 AC092070.2-203ENST00000598377 3644 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 AC087516.1-201ENST00000561236 2428 ntBASIC5.22□□□□□ -1.57
SDCBPO00560 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SDCBPO00560 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.21□□□□□ -1.57
SDCBPO00560 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SDCBPO00560 AC097634.1-201ENST00000604491 2467 ntBASIC5.21□□□□□ -1.57
SDCBPO00560 AC239868.2-201ENST00000564237 4527 ntBASIC5.21□□□□□ -1.57
SDCBPO00560 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SDCBPO00560 MSL3P1-202ENST00000440028 1468 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.21□□□□□ -1.58
SDCBPO00560 AC114876.1-201ENST00000490962 1366 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SDCBPO00560 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 RNA5SP485-201ENST00000365053 119 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 AL590399.2-201ENST00000427536 309 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.21□□□□□ -1.58
SDCBPO00560 GTF3AP6-201ENST00000432585 986 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AL731534.1-201ENST00000434711 269 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.21□□□□□ -1.58
SDCBPO00560 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.21□□□□□ -1.58
SDCBPO00560 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.21□□□□□ -1.58
SDCBPO00560 AC016908.1-201ENST00000442571 1219 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AL445991.1-201ENST00000450381 475 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AC022730.1-201ENST00000473114 568 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AC090058.1-201ENST00000498788 435 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms