Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
FOXN3O00409 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
FOXN3O00409 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
FOXN3O00409 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.9□□□□□ -1.31
FOXN3O00409 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXN3O00409 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXN3O00409 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
FOXN3O00409 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXN3O00409 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXN3O00409 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXN3O00409 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXN3O00409 RNU6-697P-201ENST00000363348 107 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 RN7SKP281-201ENST00000410472 352 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.89□□□□□ -1.31
FOXN3O00409 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXN3O00409 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXN3O00409 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXN3O00409 MTND2P25-201ENST00000449028 610 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXN3O00409 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.89□□□□□ -1.31
FOXN3O00409 SNX18P26-201ENST00000458433 740 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXN3O00409 RN7SL267P-201ENST00000485107 261 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXN3O00409 GOLGA5P1-201ENST00000507317 980 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 AC093325.1-201ENST00000508378 326 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
FOXN3O00409 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.89□□□□□ -1.31
FOXN3O00409 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.89□□□□□ -1.31
FOXN3O00409 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
FOXN3O00409 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXN3O00409 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXN3O00409 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXN3O00409 AL158211.2-201ENST00000607282 395 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 AC084036.1-201ENST00000609190 508 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 LINC02495-203ENST00000636704 242 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXN3O00409 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXN3O00409 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXN3O00409 DOCK11P1-201ENST00000553480 5932 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
FOXN3O00409 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXN3O00409 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.89□□□□□ -1.31
FOXN3O00409 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
FOXN3O00409 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXN3O00409 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXN3O00409 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
FOXN3O00409 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXN3O00409 RPL31P11-201ENST00000426558 1558 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXN3O00409 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 AC245036.1-201ENST00000391727 309 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXN3O00409 VN1R31P-201ENST00000417498 730 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 MRPS21P5-201ENST00000417885 231 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.88□□□□□ -1.31
FOXN3O00409 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXN3O00409 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.88□□□□□ -1.31
FOXN3O00409 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXN3O00409 VN1R38P-201ENST00000450265 887 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 AC018645.1-201ENST00000505003 109 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXN3O00409 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXN3O00409 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXN3O00409 RNU6-1334P-201ENST00000516032 105 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 SNORA26.10-201ENST00000516427 141 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 IGKV1D-22-201ENST00000518953 324 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.88□□□□□ -1.31
FOXN3O00409 IGHV1-14-201ENST00000523391 241 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AP005639.1-201ENST00000526939 192 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AL133399.1-201ENST00000527476 298 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AC084851.2-201ENST00000530377 364 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 OR9G2P-201ENST00000533326 880 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXN3O00409 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.88□□□□□ -1.31
FOXN3O00409 TPRX1P1-201ENST00000557620 319 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXN3O00409 LINC00557-201ENST00000563184 1279 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXN3O00409 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXN3O00409 MIR4433B-201ENST00000581329 102 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AC073046.2-201ENST00000604756 527 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 AC026367.3-201ENST00000619032 590 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AL356490.1-201ENST00000623079 479 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
FOXN3O00409 AP002371.2-201ENST00000624450 503 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AL138960.2-201ENST00000625145 535 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 AP000550.3-201ENST00000637734 379 ntBASIC6.88□□□□□ -1.31
FOXN3O00409 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
FOXN3O00409 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms