Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6□□□□□ -1.45
SLC28A1O00337 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6□□□□□ -1.45
SLC28A1O00337 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
SLC28A1O00337 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6□□□□□ -1.45
SLC28A1O00337 ZNF37CP-201ENST00000406795 241 ntBASIC6□□□□□ -1.45
SLC28A1O00337 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6□□□□□ -1.45
SLC28A1O00337 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6□□□□□ -1.45
SLC28A1O00337 GTF3AP6-201ENST00000432585 986 ntBASIC6□□□□□ -1.45
SLC28A1O00337 EMC3-AS1-205ENST00000438698 534 ntBASIC6□□□□□ -1.45
SLC28A1O00337 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6□□□□□ -1.45
SLC28A1O00337 RAB28P2-201ENST00000454299 641 ntBASIC6□□□□□ -1.45
SLC28A1O00337 AC073594.1-201ENST00000462065 364 ntBASIC6□□□□□ -1.45
SLC28A1O00337 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 RN7SL326P-201ENST00000477493 296 ntBASIC6□□□□□ -1.45
SLC28A1O00337 RN7SL267P-201ENST00000485107 261 ntBASIC6□□□□□ -1.45
SLC28A1O00337 AC093664.1-201ENST00000511779 289 ntBASIC6□□□□□ -1.45
SLC28A1O00337 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6□□□□□ -1.45
SLC28A1O00337 GTF2IP11-201ENST00000526931 420 ntBASIC6□□□□□ -1.45
SLC28A1O00337 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6□□□□□ -1.45
SLC28A1O00337 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6□□□□□ -1.45
SLC28A1O00337 AC008055.1-201ENST00000547032 609 ntBASIC6□□□□□ -1.45
SLC28A1O00337 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6□□□□□ -1.45
SLC28A1O00337 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6□□□□□ -1.45
SLC28A1O00337 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6□□□□□ -1.45
SLC28A1O00337 AL138960.1-201ENST00000613838 513 ntBASIC6□□□□□ -1.45
SLC28A1O00337 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 AC138627.1-204ENST00000641894 765 ntBASIC6□□□□□ -1.45
SLC28A1O00337 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6□□□□□ -1.45
SLC28A1O00337 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6□□□□□ -1.45
SLC28A1O00337 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6□□□□□ -1.45
SLC28A1O00337 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 ZNF101P1-201ENST00000435701 1720 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SLC28A1O00337 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SLC28A1O00337 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC022306.1-201ENST00000560489 1562 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 AC114876.1-201ENST00000490962 1366 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 GNG5P2-201ENST00000372054 207 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 AL050305.1-201ENST00000399993 1230 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC015977.1-201ENST00000418887 292 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SLC28A1O00337 GPN3P1-201ENST00000423883 535 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 GTF2IP14-201ENST00000441415 586 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC28A1O00337 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 RPL36AP55-201ENST00000454114 305 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC008945.1-201ENST00000505144 499 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC28A1O00337 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC28A1O00337 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC28A1O00337 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC28A1O00337 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC28A1O00337 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC090286.3-201ENST00000573133 187 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC020916.2-201ENST00000591242 360 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC28A1O00337 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC004890.3-201ENST00000605566 1095 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 AC068213.1-201ENST00000625124 226 ntBASIC5.99□□□□□ -1.45
SLC28A1O00337 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
SLC28A1O00337 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SLC28A1O00337 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms