Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC106800.3-201ENST00000511389 308 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 RN7SKP248-201ENST00000516278 305 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AL133399.1-201ENST00000527476 298 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 MIR6070-201ENST00000613967 103 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC092111.2-201ENST00000611627 1414 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 MIR7-1-201ENST00000384871 110 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 RAB9AP4-201ENST00000415230 609 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 UBE2V1P14-201ENST00000415815 558 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AL512637.1-201ENST00000439523 1231 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 H3F3BP1-201ENST00000440551 403 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 C1DP3-201ENST00000455013 423 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC063955.1-201ENST00000462872 685 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 RN7SL790P-201ENST00000474043 298 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 OR9A1P-202ENST00000484361 945 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC122714.1-201ENST00000502510 459 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 ATG10-AS1-201ENST00000504846 648 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 COX6B1P4-201ENST00000519826 484 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 OR7E10P-201ENST00000526420 991 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 OR9G2P-201ENST00000533326 880 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC009268.1-201ENST00000561352 1203 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 MIR3159-201ENST00000584572 74 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC091059.2-201ENST00000623355 614 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.12□□□□□ -1.59
SRRM4A7MD48 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.12□□□□□ -1.59
SRRM4A7MD48 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 378.1 ms