Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
TCRBV4S1A1TA0A5B7 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TCRBV4S1A1TA0A5B7 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TCRBV4S1A1TA0A5B7 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC005225.5-201ENST00000623547 2225 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC079753.1-201ENST00000623243 3868 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RPL23AP85-201ENST00000421838 433 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC099782.1-201ENST00000425889 474 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ARMC4P1-201ENST00000438905 707 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RARRES2P3-201ENST00000457739 473 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC022206.1-201ENST00000495947 347 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RNA5SP418-201ENST00000515951 117 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC084121.1-201ENST00000533882 835 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL078601.3-201ENST00000573303 535 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 MIR4502-201ENST00000580432 81 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC024255.1-201ENST00000614376 102 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 MIR6071-201ENST00000616741 78 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 MIR6778-201ENST00000617912 73 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SHQ1P1-201ENST00000437111 1544 ntBASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC093297.3-201ENST00000607056 2517 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL353763.1-201ENST00000624467 1628 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RPL5P20-201ENST00000403848 896 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 OSTCP4-201ENST00000424397 449 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 GM2AP2-201ENST00000491764 562 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC018645.1-201ENST00000505003 109 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RN7SKP67-201ENST00000515905 235 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SCARNA5-201ENST00000516201 276 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 IGKV1D-22-201ENST00000518953 324 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 OR4A6P-201ENST00000534364 970 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 TOMM20P1-201ENST00000534518 427 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL845552.1-201ENST00000556820 323 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC002310.3-201ENST00000569728 723 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC026898.1-201ENST00000586404 571 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SMIM12P1-201ENST00000603004 274 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL135999.3-201ENST00000610501 812 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL138960.1-201ENST00000613838 513 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 uc_338.31-201ENST00000615595 186 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL445649.1-201ENST00000615941 691 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC111152.1-202ENST00000635848 339 ntBASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LINC02495-203ENST00000636704 242 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms