Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 HSPD1P4-201ENST00000547203 1702 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AL355974.1-201ENST00000618896 1708 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 EEF1A1P22-201ENST00000559385 1380 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 SNORA73B-201ENST00000363217 204 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RNU4-4P-201ENST00000364588 130 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RPSAP72-201ENST00000407020 358 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC068138.1-201ENST00000412635 217 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 NPM1P4-201ENST00000414095 812 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 MTCYBP38-201ENST00000417160 1123 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RPL5P6-201ENST00000425640 886 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RPL5P27-201ENST00000437011 881 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RPS10P14-201ENST00000440748 502 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 OSTCP1-201ENST00000455507 450 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 TPT1P1-201ENST00000458495 518 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RNU7-125P-201ENST00000458760 62 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC096922.1-201ENST00000461635 651 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RN7SL456P-201ENST00000469290 295 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RPS7P11-201ENST00000484240 586 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AL445187.1-201ENST00000502685 260 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC113430.1-201ENST00000506872 718 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 CCNHP1-201ENST00000513311 678 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AP001000.1-201ENST00000526843 742 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC074051.3-201ENST00000570238 358 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RBM4-213ENST00000578778 582 ntTSL 4 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 YWHAQP7-201ENST00000603536 658 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC009994.1-201ENST00000606889 253 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AL161931.1-201ENST00000612768 246 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC005355.2-201ENST00000625064 484 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AC090897.3-201ENST00000636973 1157 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 AL353795.1-201ENST00000439134 1775 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 EEF1A1P28-201ENST00000450915 1403 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 APP-206ENST00000359726 3294 ntTSL 2 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 MIR551B-201ENST00000384984 96 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC099535.1-201ENST00000408928 371 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 RNU2-18P-201ENST00000411224 162 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AL008987.1-201ENST00000415528 237 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 RAC1P4-201ENST00000419413 579 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 MARK2P12-201ENST00000420129 585 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 RPL35P8-201ENST00000433284 337 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 B3GNT2P1-201ENST00000434960 952 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AL355355.1-201ENST00000442900 793 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AP000936.2-201ENST00000447151 681 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 MYO5BP2-201ENST00000449815 1277 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 CBX5P1-201ENST00000468470 561 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 RPS4XP17-201ENST00000479057 754 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 RN7SL267P-201ENST00000485107 261 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 RPL23AP73-201ENST00000492507 471 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AL133372.1-201ENST00000493565 745 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 TECRP2-201ENST00000503270 928 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC113420.1-201ENST00000507903 571 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms