Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC091849.1-201ENST00000509920 121 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 SNORA76.2-201ENST00000517095 137 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC079148.1-201ENST00000565944 819 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC233266.2-201ENST00000567067 528 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 MIR3157-201ENST00000578688 85 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC005242.1-201ENST00000585658 438 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC010463.3-201ENST00000594077 500 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC015849.2-201ENST00000605738 409 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC092159.4-201ENST00000624944 550 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC022613.3-201ENST00000560740 1346 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC217777.1-201ENST00000570034 1471 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 MAPK10-323ENST00000641493 3207 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 RN7SKP187-201ENST00000365536 330 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 RPL9P21-201ENST00000392269 505 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 PTGES3P2-201ENST00000407942 482 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 RPL36P18-201ENST00000419316 318 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 MTCYBP7-201ENST00000419540 1134 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AL358876.1-201ENST00000453364 1075 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 RPSAP37-201ENST00000470913 821 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC099340.1-201ENST00000475247 599 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC108729.2-201ENST00000476543 840 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC015908.1-201ENST00000478739 476 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC021146.7-201ENST00000509604 775 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC116917.1-201ENST00000520558 305 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AP003033.2-201ENST00000528901 805 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC023310.2-201ENST00000553844 547 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 ZNF92P2-201ENST00000600543 1059 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 AL356608.1-201ENST00000610034 820 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 AL645927.2-201ENST00000618350 349 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC105105.5-201ENST00000622635 1294 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 CDC27P2-201ENST00000425026 1922 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 AC130360.2-201ENST00000533477 1556 ntBASIC6.22□□□□□ -1.41
LRFN1Q9P244 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms