Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RN7SL422P-201ENST00000612850 261 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 RN7SL343P-201ENST00000620904 261 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 RN7SL640P-201ENST00000622591 261 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 LINC00282-201ENST00000626362 654 ntAPPRIS P5 TSL 4 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC005906.2-214ENST00000640128 1235 ntTSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 OR2L1P-202ENST00000641567 1023 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 NPY5R-201ENST00000338566 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AP003119.3-201ENST00000566747 4192 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 MTFR1-201ENST00000262146 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 Y_RNA.450-201ENST00000384198 113 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 RNU6-809P-201ENST00000384461 107 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 IGLV8-61-201ENST00000390283 414 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL355297.1-201ENST00000402808 388 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL078604.1-201ENST00000404609 466 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL590002.1-201ENST00000406554 418 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 MTCO2P19-201ENST00000427513 598 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 LSM1P1-201ENST00000438629 273 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 PGBD4P3-201ENST00000440731 581 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC026410.2-201ENST00000460281 156 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 RN7SL294P-201ENST00000477271 295 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL451124.1-201ENST00000478520 1026 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 KCTD9P5-201ENST00000504141 1170 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC245052.6-201ENST00000506567 219 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 PTGES3P3-201ENST00000511479 482 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AP003467.2-201ENST00000520175 319 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 MTND6P3-201ENST00000520612 542 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 IGHV7-27-201ENST00000522512 330 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 GPHA2-203ENST00000533257 582 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC090625.2-201ENST00000534165 518 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL133372.2-202ENST00000549360 768 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC009093.3-201ENST00000567688 351 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 SNORD39.3-201ENST00000584451 71 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 FAM95B1-204ENST00000586273 798 ntTSL 5 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC016590.1-202ENST00000586324 525 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 FAM95B1-207ENST00000589112 768 ntTSL 5 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC123912.4-201ENST00000596996 1178 ntTSL 2 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 HNRNPA1P52-201ENST00000599047 947 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 LSP1P1-201ENST00000599825 133 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 Z73429.1-201ENST00000610170 345 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL590282.1-201ENST00000610379 1136 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL354751.3-201ENST00000618526 1027 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 Metazoa_SRP.160-201ENST00000622203 277 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AC009120.7-201ENST00000623452 780 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 MIR3688-2-201ENST00000636963 87 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RTN4Q9NQC3 AL161901.1-201ENST00000624954 3425 ntBASIC10.19□□□□□ -0.78
RTN4Q9NQC3 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AL096816.1-201ENST00000623300 2920 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 MAPK10-329ENST00000641555 2656 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 RPL23AP57-201ENST00000332361 466 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms