Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MIR301B-201ENST00000390813 78 ntBASIC7.51□□□□□ -1.21
UPF2Q9HAU5 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 KRT8P51-201ENST00000438938 274 ntBASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AC009963.4-201ENST00000448535 339 ntBASIC7.51□□□□□ -1.21
UPF2Q9HAU5 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AL162739.1-201ENST00000450606 307 ntBASIC7.51□□□□□ -1.21
UPF2Q9HAU5 RN7SL643P-201ENST00000471845 291 ntBASIC7.51□□□□□ -1.21
UPF2Q9HAU5 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AL137067.2-201ENST00000621202 131 ntBASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.51□□□□□ -1.21
UPF2Q9HAU5 QRSL1P3-201ENST00000552666 1316 ntBASIC7.51□□□□□ -1.21
UPF2Q9HAU5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UPF2Q9HAU5 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 RPL5P10-201ENST00000445207 894 ntBASIC7.5□□□□□ -1.21
UPF2Q9HAU5 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 snoU109.5-201ENST00000516231 132 ntBASIC7.5□□□□□ -1.21
UPF2Q9HAU5 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 AC133552.4-201ENST00000576103 676 ntBASIC7.5□□□□□ -1.21
UPF2Q9HAU5 AP001357.1-201ENST00000586304 1053 ntBASIC7.5□□□□□ -1.21
UPF2Q9HAU5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 SNORA74.4-201ENST00000607595 199 ntBASIC7.5□□□□□ -1.21
UPF2Q9HAU5 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 OR7A1P-202ENST00000641542 1158 ntBASIC7.5□□□□□ -1.21
UPF2Q9HAU5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
UPF2Q9HAU5 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 AC018628.1-201ENST00000624147 3819 ntBASIC7.49□□□□□ -1.21
UPF2Q9HAU5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 AL080312.1-201ENST00000256654 824 ntBASIC7.49□□□□□ -1.21
UPF2Q9HAU5 RNU1-84P-201ENST00000365447 164 ntBASIC7.49□□□□□ -1.21
UPF2Q9HAU5 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 RN7SKP221-201ENST00000410420 301 ntBASIC7.49□□□□□ -1.21
UPF2Q9HAU5 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 USP24P1-201ENST00000433802 779 ntBASIC7.49□□□□□ -1.21
UPF2Q9HAU5 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 RPL23AP60-201ENST00000450011 454 ntBASIC7.49□□□□□ -1.21
UPF2Q9HAU5 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
UPF2Q9HAU5 RN7SL369P-201ENST00000477138 299 ntBASIC7.49□□□□□ -1.21
UPF2Q9HAU5 RN7SL70P-201ENST00000478322 302 ntBASIC7.49□□□□□ -1.21
UPF2Q9HAU5 PPP1R11P1-201ENST00000486095 376 ntBASIC7.49□□□□□ -1.21
UPF2Q9HAU5 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms