Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 CTAGE11P-201ENST00000451540 2353 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 MAPK10-287ENST00000641217 3037 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 MFSD8-217ENST00000641178 4374 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 SPATA31B1P-201ENST00000434692 4016 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 RNA5SP46-201ENST00000362370 120 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 AL445238.1-204ENST00000400311 463 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 AL713922.1-201ENST00000416477 747 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 KIF4CP-201ENST00000422742 1279 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 IGKV1OR10-1-201ENST00000442306 329 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 AC011225.1-201ENST00000457751 369 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 IGKV1OR22-5-201ENST00000458718 354 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 PFN1P6-201ENST00000476786 399 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 AC027229.1-201ENST00000583887 253 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 OFD1P10Y-201ENST00000434110 1433 ntBASIC9.29□□□□□ -0.92
SCAPERQ9BY12 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SCAPERQ9BY12 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 AC104581.5-201ENST00000624171 7141 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 RNA5SP443-201ENST00000363083 132 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 RNU1-19P-201ENST00000363306 165 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 AL096829.1-201ENST00000413677 457 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 GAPDHP58-201ENST00000438477 1006 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 SIAH1P1-201ENST00000479411 923 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 AC108693.1-201ENST00000496068 432 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 AC231760.1-201ENST00000498002 260 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 AC006530.1-201ENST00000555980 571 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 AL691477.1-201ENST00000624398 162 ntBASIC9.28□□□□□ -0.92
SCAPERQ9BY12 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SCAPERQ9BY12 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SCAPERQ9BY12 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
SCAPERQ9BY12 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SCAPERQ9BY12 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SCAPERQ9BY12 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
SCAPERQ9BY12 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
SCAPERQ9BY12 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 BPHL-201ENST00000380368 797 ntTSL 5 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 AC009237.1-201ENST00000442127 744 ntBASIC9.27□□□□□ -0.93
SCAPERQ9BY12 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 AC095057.1-201ENST00000507583 168 ntBASIC9.27□□□□□ -0.93
SCAPERQ9BY12 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 MIR4505-201ENST00000582238 73 ntBASIC9.27□□□□□ -0.93
SCAPERQ9BY12 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SCAPERQ9BY12 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC9.26□□□□□ -0.93
SCAPERQ9BY12 AC138915.4-201ENST00000565549 4147 ntBASIC9.26□□□□□ -0.93
SCAPERQ9BY12 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC9.26□□□□□ -0.93
SCAPERQ9BY12 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC9.26□□□□□ -0.93
SCAPERQ9BY12 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
SCAPERQ9BY12 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms