Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNA5SP287-201ENST00000516358 103 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 AC022832.1-201ENST00000530718 645 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 AP000873.5-201ENST00000533906 236 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC087257.2-201ENST00000538759 928 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 COX4I1P1-201ENST00000554239 509 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 EIF1P5-201ENST00000585002 234 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.82□□□□□ -1
TRIM47Q96LD4 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 Z82195.1-201ENST00000604558 398 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 IMMP1LP1-201ENST00000605170 488 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC008277.2-201ENST00000605196 797 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AL121782.1-201ENST00000611242 413 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.82□□□□□ -1
TRIM47Q96LD4 AC009509.4-201ENST00000619202 509 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8.82□□□□□ -1
TRIM47Q96LD4 AF246928.1-201ENST00000623768 87 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.82□□□□□ -1
TRIM47Q96LD4 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.82□□□□□ -1
TRIM47Q96LD4 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
TRIM47Q96LD4 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.82□□□□□ -1
TRIM47Q96LD4 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 AC009948.5-201ENST00000624360 4406 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.81□□□□□ -1
TRIM47Q96LD4 AC008432.1-201ENST00000615912 1320 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC8.81□□□□□ -1
TRIM47Q96LD4 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 AC136624.1-201ENST00000400791 413 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 HMGB3P19-201ENST00000403971 560 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 YWHAZP3-201ENST00000415292 738 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC8.81□□□□□ -1
TRIM47Q96LD4 FO393414.1-201ENST00000428697 1184 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 ARL6IP1P2-201ENST00000431356 563 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 CHCHD4P5-201ENST00000436684 427 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 AL161454.1-201ENST00000446226 569 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 NIPA2P5-201ENST00000452282 464 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 HMGB1P26-201ENST00000452520 628 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC8.81□□□□□ -1
TRIM47Q96LD4 AC023424.2-201ENST00000493479 777 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 AL445187.1-201ENST00000502685 260 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 NENFP3-201ENST00000503735 313 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 AP001960.1-201ENST00000506494 658 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC8.81□□□□□ -1
TRIM47Q96LD4 CBX3P3-201ENST00000508108 532 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 HNRNPRP2-201ENST00000528421 743 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 OR7E96P-201ENST00000530816 976 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 PDCL3P1-201ENST00000534575 734 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.81□□□□□ -1
TRIM47Q96LD4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.81□□□□□ -1
TRIM47Q96LD4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC8.81□□□□□ -1
TRIM47Q96LD4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.81□□□□□ -1
TRIM47Q96LD4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC8.81□□□□□ -1
TRIM47Q96LD4 AC010680.3-201ENST00000604215 520 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.81□□□□□ -1
TRIM47Q96LD4 Z99129.1-201ENST00000612510 255 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.81□□□□□ -1
TRIM47Q96LD4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.81□□□□□ -1
TRIM47Q96LD4 FP325313.1-201ENST00000638228 703 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 AC099654.12-201ENST00000639868 649 ntBASIC8.81□□□□□ -1
TRIM47Q96LD4 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.81□□□□□ -1
TRIM47Q96LD4 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
TRIM47Q96LD4 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.81□□□□□ -1
TRIM47Q96LD4 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM47Q96LD4 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.81□□□□□ -1
TRIM47Q96LD4 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms