Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.31□□□□□ -1.4
VMP1Q96GC9 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.31□□□□□ -1.4
VMP1Q96GC9 MIR4420-201ENST00000583944 77 ntBASIC6.31□□□□□ -1.4
VMP1Q96GC9 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.31□□□□□ -1.4
VMP1Q96GC9 RPL7AP69-201ENST00000595306 806 ntBASIC6.31□□□□□ -1.4
VMP1Q96GC9 AC036176.3-201ENST00000602456 418 ntBASIC6.31□□□□□ -1.4
VMP1Q96GC9 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.31□□□□□ -1.4
VMP1Q96GC9 AC091768.1-201ENST00000609258 930 ntBASIC6.31□□□□□ -1.4
VMP1Q96GC9 AL138693.1-201ENST00000622219 129 ntBASIC6.31□□□□□ -1.4
VMP1Q96GC9 AC120057.5-201ENST00000623840 154 ntBASIC6.31□□□□□ -1.4
VMP1Q96GC9 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VMP1Q96GC9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.31□□□□□ -1.4
VMP1Q96GC9 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VMP1Q96GC9 AC093849.1-201ENST00000563631 2209 ntBASIC6.31□□□□□ -1.4
VMP1Q96GC9 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VMP1Q96GC9 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
VMP1Q96GC9 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VMP1Q96GC9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VMP1Q96GC9 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VMP1Q96GC9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VMP1Q96GC9 DOCK11P1-201ENST00000553480 5932 ntBASIC6.31□□□□□ -1.4
VMP1Q96GC9 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 MIR551B-201ENST00000384984 96 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 MIR137-201ENST00000385223 102 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC026310.1-201ENST00000396004 378 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC006509.1-201ENST00000420788 634 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC083855.1-201ENST00000440041 258 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 OR6C72P-201ENST00000451403 892 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 RN7SL165P-201ENST00000477476 291 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 RN7SL70P-201ENST00000478322 302 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC091849.1-201ENST00000509920 121 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC011352.2-201ENST00000514574 1016 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 MRPS5P3-201ENST00000515577 166 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 RN7SKP34-201ENST00000516142 244 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC122713.1-201ENST00000518368 1015 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC025857.1-201ENST00000525252 377 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 CTSLP2-201ENST00000580501 394 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC006328.2-201ENST00000623198 397 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC012005.2-201ENST00000624333 397 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 SNORA16A-202ENST00000628458 135 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 CLUHP10-201ENST00000631979 980 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 AL034546.1-201ENST00000623740 3693 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 AC009120.2-204ENST00000621548 2032 ntBASIC6.3□□□□□ -1.4
VMP1Q96GC9 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VMP1Q96GC9 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
VMP1Q96GC9 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 Z97989.1-201ENST00000531702 2421 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 RNU1-55P-201ENST00000365510 158 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms