Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 AL445238.1-204ENST00000400311 463 ntBASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 AC104843.2-201ENST00000427666 297 ntBASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 AC010240.2-201ENST00000445363 1205 ntBASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 RPL23AP60-201ENST00000450011 454 ntBASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 SNX18P25-201ENST00000510539 758 ntBASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 RNA5SP418-201ENST00000515951 117 ntBASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 AL034408.1-201ENST00000637712 664 ntBASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SHROOM3Q8TF72 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 CCNT2P1-201ENST00000423082 1315 ntBASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 SNORD16-201ENST00000362803 99 ntBASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 RNA5SP510-201ENST00000364697 99 ntBASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 RN7SKP81-201ENST00000365603 331 ntBASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 AL512593.1-201ENST00000444758 779 ntBASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 SBDSP1-204ENST00000453858 737 ntBASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 AC112191.2-201ENST00000522428 333 ntBASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 SNORA74.4-201ENST00000607595 199 ntBASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SHROOM3Q8TF72 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 HSPD1P4-201ENST00000547203 1702 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 CASC19-246ENST00000641625 1606 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC012213.2-201ENST00000562917 4597 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 RNA5SP478-201ENST00000364657 115 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 YWHAZP4-201ENST00000392459 708 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 PRELID1P1-201ENST00000403549 660 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AL157884.1-201ENST00000424561 454 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC092967.1-201ENST00000449016 481 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 RN7SL643P-201ENST00000471845 291 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 RN7SL326P-201ENST00000477493 296 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 SNORD46.2-201ENST00000516021 102 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 MIR4700-201ENST00000578311 74 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC073046.2-201ENST00000604756 527 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 uc_338.26-201ENST00000612659 160 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC024884.1-201ENST00000620583 399 ntBASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM3Q8TF72 MIR105-2-201ENST00000385083 81 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC007568.1-201ENST00000422912 471 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC099782.1-201ENST00000425889 474 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC090115.2-201ENST00000548060 883 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AL021707.7-201ENST00000607991 416 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AL109924.4-201ENST00000623089 670 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms