Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RN7SL466P-201ENST00000497546 295 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 AC138866.2-201ENST00000508650 584 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 AP006245.2-201ENST00000522004 300 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 MIR5095-201ENST00000578844 88 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 SUMO2P15-201ENST00000604285 278 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 AC096861.1-201ENST00000616652 240 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 AC012254.3-201ENST00000591183 2117 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 AC013488.1-201ENST00000526618 1838 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 AC025809.2-201ENST00000625085 1802 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 AL050335.1-201ENST00000396909 869 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 AL627308.1-201ENST00000435693 821 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 AC002504.1-201ENST00000438281 691 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 AC074087.1-201ENST00000512059 724 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 RNA5SP34-201ENST00000516887 130 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 MIR3189-201ENST00000578735 73 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 AL445670.1-201ENST00000618889 801 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 AL137067.2-201ENST00000621202 131 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 MIR193BHG-214ENST00000641765 509 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 AL008638.3-201ENST00000623027 5182 ntBASIC7.47□□□□□ -1.21
SNED1Q8TER0 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNED1Q8TER0 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.47□□□□□ -1.21
SNED1Q8TER0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
SNED1Q8TER0 CCNT2P1-201ENST00000423082 1315 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 AC109780.1-201ENST00000451768 1344 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SNED1Q8TER0 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SNED1Q8TER0 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 AL096829.1-201ENST00000413677 457 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 VN1R38P-201ENST00000450265 887 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SNED1Q8TER0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 NENFP3-201ENST00000503735 313 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 CYCSP22-201ENST00000517555 339 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 PCNAP4-201ENST00000532690 730 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 AC092865.1-201ENST00000544395 1023 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 DPPA2P4-201ENST00000563717 878 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.46□□□□□ -1.21
SNED1Q8TER0 AC239803.2-201ENST00000610161 430 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 AC016769.4-201ENST00000616893 535 ntBASIC7.46□□□□□ -1.21
SNED1Q8TER0 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
SNED1Q8TER0 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.46□□□□□ -1.22
SNED1Q8TER0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.46□□□□□ -1.22
SNED1Q8TER0 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SNED1Q8TER0 NEPNP-201ENST00000404786 1371 ntBASIC7.46□□□□□ -1.22
SNED1Q8TER0 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms