Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 EEF1GP6-201ENST00000402309 905 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 RN7SKP254-201ENST00000410685 310 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL008987.1-201ENST00000415528 237 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 PHB2P1-201ENST00000434943 890 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 VN1R54P-201ENST00000435210 1049 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 ELOCP8-201ENST00000439309 332 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 ELOCP15-201ENST00000442090 332 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 SLAMF6P1-201ENST00000451067 602 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL591122.1-201ENST00000487348 492 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 MTCO2P30-201ENST00000503662 364 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 IGHVIII-25-1-201ENST00000522143 241 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AC090115.2-201ENST00000548060 883 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 CCL2-202ENST00000580907 736 ntTSL 2 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AC090616.5-202ENST00000582111 297 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 MIR5682-201ENST00000584864 76 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL031985.2-201ENST00000600955 480 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL591222.2-201ENST00000604443 754 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AC126118.1-201ENST00000607744 628 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AP005229.2-201ENST00000609980 697 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL121757.2-201ENST00000611223 313 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 MIR6774-201ENST00000614651 70 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL161420.1-201ENST00000619393 264 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 AL445250.1-203ENST00000641829 1535 ntBASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NEDD1Q8NHV4 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 PSMC1P4-201ENST00000515236 1327 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 PDCL3P5-201ENST00000398028 722 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 GPN3P1-201ENST00000423883 535 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 UQCRHP1-204ENST00000424609 274 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 MRPS33P4-201ENST00000434892 317 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 MTCO3P38-201ENST00000468910 766 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AL135933.1-201ENST00000498657 802 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC122714.1-201ENST00000502510 459 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 OR10J9P-201ENST00000511932 987 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC104383.1-201ENST00000530297 370 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 OR8L1P-201ENST00000534005 955 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AL135978.1-201ENST00000553618 1266 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 ZNF519P3-201ENST00000557158 1032 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 SIGLEC31P-201ENST00000594237 551 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC012676.3-201ENST00000614983 479 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC245389.2-201ENST00000616023 576 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC242843.1-201ENST00000618702 573 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 AC012150.2-201ENST00000621300 544 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 MIR665-201ENST00000635949 72 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NEDD1Q8NHV4 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms