Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC010878.1-201ENST00000456500 1047 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 RPS26P11-201ENST00000463445 348 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 RPL34P34-201ENST00000465389 354 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC022730.1-201ENST00000473114 568 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 RPS26P6-201ENST00000475156 348 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 HMGB1P3-201ENST00000502802 616 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC055733.3-201ENST00000505214 523 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC010486.2-201ENST00000505572 483 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 HPRT1P1-201ENST00000509498 657 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC013283.1-201ENST00000557282 492 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC027455.1-201ENST00000574104 594 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC010620.1-201ENST00000601088 1102 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC079880.2-201ENST00000603790 1213 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AL356752.1-201ENST00000615844 593 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC008115.4-201ENST00000619780 775 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AL450226.2-201ENST00000622913 439 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC135068.11-201ENST00000636378 921 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AL359263.1-201ENST00000441188 2796 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
TRIM48Q8IWZ4 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
TRIM48Q8IWZ4 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
TRIM48Q8IWZ4 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.84□□□□□ -1.32
TRIM48Q8IWZ4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 CDY19P-201ENST00000411668 1613 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 CDY18P-201ENST00000438294 1609 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC092821.3-202ENST00000641304 2767 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC009220.2-201ENST00000489759 1751 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 RNA5SP172-201ENST00000365061 118 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 RAB5CP1-201ENST00000395972 580 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AL078595.1-201ENST00000404458 226 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 UBE2V1P11-201ENST00000411559 285 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 RPL17P17-201ENST00000419491 557 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC093422.3-201ENST00000428506 305 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 HIGD1AP4-201ENST00000430194 280 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AGKP1-201ENST00000455254 1263 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC010468.1-201ENST00000461022 817 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 RN7SL160P-201ENST00000468558 284 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 CBX1P5-201ENST00000475330 559 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC091435.1-201ENST00000505442 584 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC113420.1-201ENST00000507903 571 ntBASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM48Q8IWZ4 MTND1P22-201ENST00000510572 951 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms