Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RPS4XP14-201ENST00000493072 781 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 PSMA2P2-201ENST00000504319 686 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC095052.1-201ENST00000509955 863 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 RNU6-362P-201ENST00000516736 90 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC027308.1-201ENST00000517993 110 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC025423.2-201ENST00000537570 439 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 DPPA3P2-201ENST00000553589 478 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC092332.1-201ENST00000563684 829 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 RN7SL404P-201ENST00000582421 281 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC138473.1-201ENST00000605717 526 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC139426.3-201ENST00000605648 2059 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AL359694.2-201ENST00000567753 1615 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 Z93929.1-201ENST00000418200 1475 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 RNA5SP65-201ENST00000363166 119 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 RNU1-24P-201ENST00000364285 165 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 RPL36P18-201ENST00000419316 318 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 MTND6P12-201ENST00000428247 522 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 BRWD1P3-201ENST00000428816 390 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 ATP5LP2-201ENST00000440646 311 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AC007998.1-201ENST00000474156 672 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 OR2A3P-201ENST00000493774 953 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AC096754.1-201ENST00000508904 818 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SNORD46.2-201ENST00000516021 102 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 OR9L1P-201ENST00000529493 933 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AC007346.1-201ENST00000569208 867 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AP005136.2-201ENST00000583253 1049 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AC073046.2-201ENST00000604756 527 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SNORA74.4-201ENST00000607595 199 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AC096586.2-201ENST00000610260 441 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AC127024.6-201ENST00000621598 424 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AP000577.1-201ENST00000624366 878 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AC079949.2-201ENST00000617117 2933 ntBASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HERC6Q8IVU3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7□□□□□ -1.29
HERC6Q8IVU3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7□□□□□ -1.29
HERC6Q8IVU3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7□□□□□ -1.29
HERC6Q8IVU3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HERC6Q8IVU3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HERC6Q8IVU3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HERC6Q8IVU3 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms