Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC28Q86X40 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC114876.1-201ENST00000490962 1366 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC28Q86X40 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC28Q86X40 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC28Q86X40 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC28Q86X40 RNA5SP478-201ENST00000364657 115 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 AL121977.1-201ENST00000401636 979 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 AL359694.1-201ENST00000403247 604 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC28Q86X40 RN7SKP129-201ENST00000410288 299 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 RN7SKP17-201ENST00000411242 351 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC015977.1-201ENST00000418887 292 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC013403.1-201ENST00000436954 263 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 RPL12P49-201ENST00000441100 121 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 UBBP5-201ENST00000446970 266 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 RPL9P15-201ENST00000491096 532 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC005519.1-201ENST00000554490 601 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 MIR4732-201ENST00000581873 76 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 RPL29P33-201ENST00000587474 316 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 RAB28P4-201ENST00000622233 665 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 AP000550.3-201ENST00000637734 379 ntBASIC5.6□□□□□ -1.51
LRRC28Q86X40 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC28Q86X40 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC28Q86X40 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC28Q86X40 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC217777.1-201ENST00000570034 1471 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC140134.1-201ENST00000511830 3544 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 MIR191-201ENST00000384873 92 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 RN7SKP151-201ENST00000410230 316 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AL590399.2-201ENST00000427536 309 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC128677.1-201ENST00000436016 442 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC004890.1-201ENST00000461005 181 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 IGKV1D-22-201ENST00000518953 324 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 OR9G2P-201ENST00000533326 880 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 MIR3157-201ENST00000578688 85 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 MIR212-201ENST00000586026 110 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC114477.1-201ENST00000605097 605 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC000095.2-202ENST00000637415 154 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 AC116667.2-201ENST00000641075 823 ntBASIC5.59□□□□□ -1.51
LRRC28Q86X40 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
LRRC28Q86X40 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC28Q86X40 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms