Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OR7L1P-201ENST00000456181 380 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 RNU6-775P-201ENST00000459318 96 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 RN7SL413P-201ENST00000482700 297 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 H3F3AP3-201ENST00000497682 407 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AP001960.1-201ENST00000506494 658 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC093870.1-201ENST00000506837 213 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 ASNSP4-201ENST00000511103 447 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC021146.10-201ENST00000515628 706 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 OR52K3P-201ENST00000531655 943 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 MIR212-201ENST00000586026 110 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC005479.3-201ENST00000602790 431 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 BUB1P1-201ENST00000603541 607 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AP001264.1-201ENST00000620602 703 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC073488.9-201ENST00000631601 754 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 AC022905.1-201ENST00000503430 3048 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 API5P1-201ENST00000424316 1510 ntBASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP54Q7Z3B4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC011416.1-201ENST00000514947 1732 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 FAM32BP-201ENST00000344033 333 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AL050335.1-201ENST00000396909 869 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AL353626.3-201ENST00000413399 657 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 Z82198.3-201ENST00000421145 199 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 REREP1Y-201ENST00000422655 198 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 MGAT2P2-201ENST00000427194 797 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC128677.1-201ENST00000436016 442 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AL138787.1-202ENST00000437804 898 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 REREP2Y-201ENST00000439103 200 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 RPS18P1-201ENST00000447840 458 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC073476.1-201ENST00000452854 407 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC092824.1-201ENST00000483524 576 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC015524.1-201ENST00000491585 472 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 NACAP5-201ENST00000509863 636 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 SYPL1P2-201ENST00000582878 727 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC012254.5-201ENST00000623573 478 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC018692.2-201ENST00000624130 348 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms