Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 MIR141-201ENST00000384975 95 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC126120.1-201ENST00000431082 470 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 MGAT2P1-201ENST00000449718 797 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 STRADBP1-201ENST00000478954 1281 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC063977.5-201ENST00000601044 974 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC010245.2-201ENST00000606908 1167 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 MFSD8-239ENST00000641590 2479 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC126755.2-208ENST00000327792 462 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC138969.1-213ENST00000331436 462 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 OR4K12P-201ENST00000406538 961 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC097721.1-201ENST00000427150 1253 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC104164.1-201ENST00000460282 590 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC023824.7-201ENST00000623041 5731 ntBASIC4.82□□□□□ -1.64
VPS13CQ709C8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS13CQ709C8 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS13CQ709C8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 GSTP1P1-201ENST00000548078 319 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 MRPS21P7-201ENST00000566937 238 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AL022394.1-201ENST00000606979 292 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 AC132068.1-201ENST00000623805 459 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 YES1P1-201ENST00000418510 1628 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AL139805.2-201ENST00000455305 2433 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 SLC25A53-202ENST00000594199 6225 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AL356967.1-201ENST00000406305 431 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 HMGA1P8-201ENST00000414130 321 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AC089998.1-201ENST00000548575 3141 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 RN7SKP28-201ENST00000364770 305 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 AL663074.2-201ENST00000440621 479 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 AC004129.2-201ENST00000457229 287 ntBASIC4.81□□□□□ -1.64
VPS13CQ709C8 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS13CQ709C8 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS13CQ709C8 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms