Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AC010624.4-201ENST00000597606 1351 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 MTHFD2P5-201ENST00000320415 844 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 RNA5SP442-201ENST00000365050 107 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 RNU6-152P-201ENST00000384037 107 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 RNA5SP474-201ENST00000391234 90 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 RN7SKP296-201ENST00000411185 341 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 USP9YP19-201ENST00000412165 485 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 AL139135.1-201ENST00000412675 209 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 RPL18AP14-201ENST00000417685 526 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 RPS7P12-201ENST00000422385 582 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AL356806.1-201ENST00000422524 916 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 Z68868.1-201ENST00000429048 544 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 SNRPCP3-201ENST00000474888 476 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 AC022336.1-201ENST00000475510 337 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 RPL7AP30-201ENST00000482859 796 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 SNRPCP6-201ENST00000528310 210 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 MIR3159-201ENST00000584572 74 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AL157899.1-201ENST00000604110 936 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 QTRT1P1-201ENST00000604344 1078 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 RAB28P4-201ENST00000622233 665 ntBASIC6.75□□□□□ -1.33
CCDC38Q502W7 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 RNA5SP152-201ENST00000365184 110 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 MIR431-201ENST00000385266 114 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 RNU11-6P-201ENST00000391127 133 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AL359694.1-201ENST00000403247 604 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AL023284.3-201ENST00000407767 334 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 NPM1P26-201ENST00000426339 738 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 TXNP2-201ENST00000443918 295 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC008868.1-201ENST00000509786 737 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC096661.1-201ENST00000515870 822 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC117503.3-201ENST00000623811 601 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC020923.1-201ENST00000624021 917 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC38Q502W7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms