Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AK3P5-201ENST00000432033 519 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 CLIC4P1-201ENST00000453177 535 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 RN7SL379P-201ENST00000479912 293 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 RN7SKP196-201ENST00000516267 345 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 C1DP5-201ENST00000525775 383 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC016144.1-201ENST00000548175 1087 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC068726.1-201ENST00000610993 341 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
CCDC144BQ3MJ40 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 DDX18P6-201ENST00000450119 1997 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 RNA5SP85-201ENST00000365378 119 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 VN1R12P-201ENST00000403778 876 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 GUSBP9-201ENST00000510138 584 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 RNA5SP318-201ENST00000516352 92 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC087752.2-201ENST00000521219 281 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 OR4A21P-201ENST00000532759 944 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 SETP17-201ENST00000534163 817 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AL512310.9-201ENST00000553311 948 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC121758.1-202ENST00000556917 658 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC090888.3-201ENST00000558917 509 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 MIR5095-201ENST00000578844 88 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 RNU6-84P-201ENST00000607737 102 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 MIR7109-201ENST00000613748 65 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC004477.3-201ENST00000614061 590 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC090617.9-201ENST00000623751 147 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AP003476.1-201ENST00000623984 516 ntBASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC144BQ3MJ40 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 AC012078.1-201ENST00000405035 1646 ntBASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC144BQ3MJ40 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms