Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC011815.2-201ENST00000618230 2021 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AL359976.1-201ENST00000418655 3528 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AL355488.2-201ENST00000609909 2850 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AP000473.2-201ENST00000602659 1537 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 RNA5SP302-201ENST00000364896 100 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AL590635.1-201ENST00000406314 586 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 RN7SKP205-201ENST00000410999 307 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 ELOBP4-201ENST00000423418 296 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 BX119904.3-201ENST00000428194 957 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AL390879.1-201ENST00000439143 386 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC009237.1-201ENST00000442127 744 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 BMS1P11-201ENST00000442351 885 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC079922.1-201ENST00000443291 359 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 SLAMF6P1-201ENST00000451067 602 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC022080.2-201ENST00000452932 533 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 BMS1P9-201ENST00000457640 885 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 RN7SL70P-201ENST00000478322 302 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 RPL7AP30-201ENST00000482859 796 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 RN7SL657P-201ENST00000582431 293 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC012175.1-201ENST00000603755 531 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 RPS4XP21-201ENST00000603814 750 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 Z93930.3-201ENST00000607919 749 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 AC010266.2-201ENST00000564741 3255 ntBASIC4.84□□□□□ -1.63
HIST1H1AQ02539 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.84□□□□□ -1.63
HIST1H1AQ02539 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HIST1H1AQ02539 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
HIST1H1AQ02539 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
HIST1H1AQ02539 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HIST1H1AQ02539 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.84□□□□□ -1.64
HIST1H1AQ02539 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC4.84□□□□□ -1.64
HIST1H1AQ02539 USP46-202ENST00000451218 4622 ntTSL 5 BASIC4.84□□□□□ -1.64
HIST1H1AQ02539 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HIST1H1AQ02539 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC009220.2-201ENST00000489759 1751 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AL353763.1-201ENST00000624467 1628 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 MTCO1P7-201ENST00000419523 1542 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 RN7SKP191-201ENST00000364713 306 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 MRPL32P1-201ENST00000406301 247 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 RPL23AP85-201ENST00000421838 433 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 MGAT2P2-201ENST00000427194 797 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC009244.1-201ENST00000450566 258 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 RPL5P14-201ENST00000494197 878 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms