Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC244100.4-201ENST00000617747 388 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.63□□□□□ -1.51
H3F3AP84243 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 AC119674.1-213ENST00000641177 1386 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.63□□□□□ -1.51
H3F3AP84243 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.63□□□□□ -1.51
H3F3AP84243 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
H3F3AP84243 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.63□□□□□ -1.51
H3F3AP84243 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
H3F3AP84243 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.63□□□□□ -1.51
H3F3AP84243 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
H3F3AP84243 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3AP84243 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.62□□□□□ -1.51
H3F3AP84243 RPL11P4-201ENST00000332269 436 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 SNORD8-201ENST00000363915 110 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 RNU11-6P-201ENST00000391127 133 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.62□□□□□ -1.51
H3F3AP84243 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 VN1R20P-201ENST00000425215 966 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3AP84243 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 H3F3BP1-201ENST00000440551 403 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 AL022237.1-201ENST00000446663 358 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.62□□□□□ -1.51
H3F3AP84243 RN7SKP67-201ENST00000515905 235 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.62□□□□□ -1.51
H3F3AP84243 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3AP84243 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.62□□□□□ -1.51
H3F3AP84243 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.62□□□□□ -1.51
H3F3AP84243 AP003033.2-201ENST00000528901 805 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3AP84243 RPA2P3-201ENST00000533268 770 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.62□□□□□ -1.51
H3F3AP84243 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.62□□□□□ -1.51
H3F3AP84243 MIR3189-201ENST00000578735 73 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 AC138207.8-204ENST00000579588 527 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 AC006924.1-201ENST00000610750 559 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.62□□□□□ -1.51
H3F3AP84243 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3AP84243 AC092692.1-201ENST00000623625 2595 ntBASIC5.62□□□□□ -1.51
H3F3AP84243 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3AP84243 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3AP84243 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3AP84243 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3AP84243 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
H3F3AP84243 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
H3F3AP84243 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
H3F3AP84243 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.61□□□□□ -1.51
H3F3AP84243 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
H3F3AP84243 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
H3F3AP84243 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
H3F3AP84243 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 CXCR2P1-202ENST00000443392 1074 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.61□□□□□ -1.51
H3F3AP84243 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
H3F3AP84243 RN7SL552P-201ENST00000462094 276 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 RN7SL165P-201ENST00000477476 291 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 AC044810.1-201ENST00000480271 711 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 AC106822.1-201ENST00000502647 526 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 AC092349.1-201ENST00000504903 310 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.61□□□□□ -1.51
H3F3AP84243 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.61□□□□□ -1.51
H3F3AP84243 AP001858.2-201ENST00000536213 601 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
H3F3AP84243 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.61□□□□□ -1.51
H3F3AP84243 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.61□□□□□ -1.51
H3F3AP84243 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 AC121758.1-202ENST00000556917 658 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms