Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM4P67936 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM4P67936 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM4P67936 RN7SKP191-201ENST00000364713 306 ntBASIC6.9□□□□□ -1.3
TPM4P67936 RN7SKP186-201ENST00000365371 303 ntBASIC6.9□□□□□ -1.3
TPM4P67936 FDPSP5-201ENST00000399474 1057 ntBASIC6.9□□□□□ -1.3
TPM4P67936 AC024937.2-201ENST00000411669 1242 ntBASIC6.9□□□□□ -1.3
TPM4P67936 RPL18AP14-201ENST00000417685 526 ntBASIC6.9□□□□□ -1.3
TPM4P67936 AL354707.3-201ENST00000427308 331 ntBASIC6.9□□□□□ -1.3
TPM4P67936 RPS3AP38-201ENST00000435889 763 ntBASIC6.9□□□□□ -1.3
TPM4P67936 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM4P67936 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.9□□□□□ -1.3
TPM4P67936 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM4P67936 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.9□□□□□ -1.3
TPM4P67936 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM4P67936 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM4P67936 VDAC2P2-201ENST00000544463 901 ntBASIC6.9□□□□□ -1.3
TPM4P67936 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.9□□□□□ -1.3
TPM4P67936 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.9□□□□□ -1.3
TPM4P67936 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM4P67936 AC026956.1-201ENST00000558741 396 ntBASIC6.9□□□□□ -1.3
TPM4P67936 AF186192.2-204ENST00000581667 524 ntBASIC6.9□□□□□ -1.3
TPM4P67936 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM4P67936 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM4P67936 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.9□□□□□ -1.3
TPM4P67936 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.9□□□□□ -1.3
TPM4P67936 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM4P67936 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM4P67936 AL022311.1-201ENST00000623726 19416 ntBASIC6.9□□□□□ -1.31
TPM4P67936 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
TPM4P67936 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.9□□□□□ -1.31
TPM4P67936 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.9□□□□□ -1.31
TPM4P67936 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
TPM4P67936 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.9□□□□□ -1.31
TPM4P67936 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TPM4P67936 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
TPM4P67936 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.9□□□□□ -1.31
TPM4P67936 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM4P67936 AL359955.1-201ENST00000455242 3275 ntBASIC6.89□□□□□ -1.31
TPM4P67936 CASC19-260ENST00000641828 2001 ntBASIC6.89□□□□□ -1.31
TPM4P67936 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM4P67936 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
TPM4P67936 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.89□□□□□ -1.31
TPM4P67936 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM4P67936 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM4P67936 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM4P67936 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
TPM4P67936 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.89□□□□□ -1.31
TPM4P67936 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.89□□□□□ -1.31
TPM4P67936 OR52U1P-201ENST00000439752 923 ntBASIC6.89□□□□□ -1.31
TPM4P67936 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.89□□□□□ -1.31
TPM4P67936 AL020997.1-201ENST00000446554 349 ntBASIC6.89□□□□□ -1.31
TPM4P67936 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.89□□□□□ -1.31
TPM4P67936 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.89□□□□□ -1.31
TPM4P67936 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
TPM4P67936 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.89□□□□□ -1.31
TPM4P67936 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.89□□□□□ -1.31
TPM4P67936 AL049779.3-201ENST00000557141 606 ntBASIC6.89□□□□□ -1.31
TPM4P67936 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.89□□□□□ -1.31
TPM4P67936 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.89□□□□□ -1.31
TPM4P67936 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.89□□□□□ -1.31
TPM4P67936 RPS4XP21-201ENST00000603814 750 ntBASIC6.89□□□□□ -1.31
TPM4P67936 AC073046.2-201ENST00000604756 527 ntBASIC6.89□□□□□ -1.31
TPM4P67936 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TPM4P67936 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
TPM4P67936 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.89□□□□□ -1.31
TPM4P67936 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TPM4P67936 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
TPM4P67936 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
TPM4P67936 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.89□□□□□ -1.31
TPM4P67936 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TPM4P67936 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TPM4P67936 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TPM4P67936 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.88□□□□□ -1.31
TPM4P67936 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM4P67936 AL136984.1-201ENST00000607611 1893 ntBASIC6.88□□□□□ -1.31
TPM4P67936 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TPM4P67936 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM4P67936 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
TPM4P67936 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
TPM4P67936 U3.23-201ENST00000391132 200 ntBASIC6.88□□□□□ -1.31
TPM4P67936 AC009506.2-201ENST00000420635 840 ntBASIC6.88□□□□□ -1.31
TPM4P67936 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.88□□□□□ -1.31
TPM4P67936 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.88□□□□□ -1.31
TPM4P67936 AL590399.4-201ENST00000436561 601 ntBASIC6.88□□□□□ -1.31
TPM4P67936 AC092106.2-201ENST00000436597 487 ntBASIC6.88□□□□□ -1.31
TPM4P67936 Z83838.1-202ENST00000456225 839 ntBASIC6.88□□□□□ -1.31
TPM4P67936 AKR1D1P1-201ENST00000457236 936 ntBASIC6.88□□□□□ -1.31
TPM4P67936 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM4P67936 AC124945.1-201ENST00000485133 188 ntBASIC6.88□□□□□ -1.31
TPM4P67936 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM4P67936 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.88□□□□□ -1.31
TPM4P67936 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
TPM4P67936 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.88□□□□□ -1.31
TPM4P67936 IGHV4-55-201ENST00000520889 368 ntBASIC6.88□□□□□ -1.31
TPM4P67936 TPM3P3-201ENST00000521343 354 ntBASIC6.88□□□□□ -1.31
TPM4P67936 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM4P67936 RBMS2P1-201ENST00000525031 1226 ntBASIC6.88□□□□□ -1.31
TPM4P67936 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.88□□□□□ -1.31
TPM4P67936 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms