Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
RIPK4P57078 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RIPK4P57078 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RIPK4P57078 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
RIPK4P57078 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RIPK4P57078 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
RIPK4P57078 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC8.14□□□□□ -1.11
RIPK4P57078 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.14□□□□□ -1.11
RIPK4P57078 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RIPK4P57078 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.14□□□□□ -1.11
RIPK4P57078 RNA5SP115-201ENST00000411160 107 ntBASIC8.14□□□□□ -1.11
RIPK4P57078 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC8.14□□□□□ -1.11
RIPK4P57078 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.14□□□□□ -1.11
RIPK4P57078 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.14□□□□□ -1.11
RIPK4P57078 AC073594.1-201ENST00000462065 364 ntBASIC8.14□□□□□ -1.11
RIPK4P57078 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC8.14□□□□□ -1.11
RIPK4P57078 AC090958.1-201ENST00000511122 351 ntBASIC8.14□□□□□ -1.11
RIPK4P57078 IGKV3D-25-201ENST00000519599 235 ntBASIC8.14□□□□□ -1.11
RIPK4P57078 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.14□□□□□ -1.11
RIPK4P57078 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.14□□□□□ -1.11
RIPK4P57078 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.14□□□□□ -1.11
RIPK4P57078 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 AL499605.1-201ENST00000604628 403 ntBASIC8.14□□□□□ -1.11
RIPK4P57078 AC024589.2-201ENST00000605642 1294 ntBASIC8.14□□□□□ -1.11
RIPK4P57078 AP001052.1-201ENST00000626421 99 ntBASIC8.14□□□□□ -1.11
RIPK4P57078 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.14□□□□□ -1.11
RIPK4P57078 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 AC011416.1-201ENST00000514947 1732 ntBASIC8.14□□□□□ -1.11
RIPK4P57078 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RIPK4P57078 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RIPK4P57078 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC8.13□□□□□ -1.11
RIPK4P57078 AC010168.2-201ENST00000562691 5428 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.13□□□□□ -1.11
RIPK4P57078 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.13□□□□□ -1.11
RIPK4P57078 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RIPK4P57078 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC8.13□□□□□ -1.11
RIPK4P57078 HDAC1P2-201ENST00000453661 1398 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 AL354854.1-201ENST00000455940 1363 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 LINC01616-201ENST00000561816 2280 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.13□□□□□ -1.11
RIPK4P57078 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 SNORA21-201ENST00000362423 132 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.13□□□□□ -1.11
RIPK4P57078 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC8.13□□□□□ -1.11
RIPK4P57078 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 AKR1B10P1-201ENST00000425765 942 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 Z83838.1-202ENST00000456225 839 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 RN7SL221P-201ENST00000466190 281 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 SUMO2P19-201ENST00000518920 295 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.13□□□□□ -1.11
RIPK4P57078 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.13□□□□□ -1.11
RIPK4P57078 AC021269.1-201ENST00000526860 705 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 AC005363.1-201ENST00000530779 351 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 RPA2P3-201ENST00000533268 770 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 AC007346.1-201ENST00000569208 867 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 AC137695.1-201ENST00000604126 489 ntBASIC8.13□□□□□ -1.11
RIPK4P57078 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.13□□□□□ -1.11
RIPK4P57078 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.13□□□□□ -1.11
RIPK4P57078 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.13□□□□□ -1.11
RIPK4P57078 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RIPK4P57078 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.13□□□□□ -1.11
RIPK4P57078 AC022325.1-201ENST00000502748 2199 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.12□□□□□ -1.11
RIPK4P57078 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC8.12□□□□□ -1.11
RIPK4P57078 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 MAPK10-261ENST00000641050 3109 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 AC024651.2-201ENST00000562480 2098 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.12□□□□□ -1.11
RIPK4P57078 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RIPK4P57078 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
RIPK4P57078 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RIPK4P57078 FUNDC2P3-201ENST00000334716 533 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC8.12□□□□□ -1.11
RIPK4P57078 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RIPK4P57078 OOSP1-201ENST00000398992 1270 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 OR7E156P-201ENST00000400303 464 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms