Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 GPN3P1-201ENST00000423883 535 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 MTCO2P1-201ENST00000424648 477 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXG1P55316 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXG1P55316 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXG1P55316 RPSAP32-201ENST00000432681 526 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 MED28P4-201ENST00000433137 572 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXG1P55316 AC099063.2-201ENST00000446360 662 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 MTND1P31-201ENST00000449206 961 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXG1P55316 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
FOXG1P55316 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXG1P55316 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXG1P55316 HMGN1P15-201ENST00000513870 295 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXG1P55316 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 IGLV3-6-201ENST00000523937 250 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.7□□□□□ -1.5
FOXG1P55316 AC135983.3-201ENST00000528049 1226 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 AP003049.1-201ENST00000529418 457 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXG1P55316 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXG1P55316 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXG1P55316 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXG1P55316 MIR5095-201ENST00000578844 88 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXG1P55316 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXG1P55316 AC011500.1-201ENST00000601963 469 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXG1P55316 AL713998.2-201ENST00000604538 1198 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.7□□□□□ -1.5
FOXG1P55316 MIR6780B-201ENST00000610307 79 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 AC012676.3-201ENST00000614983 479 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 uc_338.29-201ENST00000615099 168 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 MIR6085-201ENST00000618314 110 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.7□□□□□ -1.5
FOXG1P55316 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
FOXG1P55316 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 MFSD8-213ENST00000641134 1327 ntBASIC5.7□□□□□ -1.5
FOXG1P55316 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXG1P55316 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXG1P55316 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
FOXG1P55316 RPL31P11-201ENST00000426558 1558 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXG1P55316 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 RN7SKP281-201ENST00000410472 352 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
FOXG1P55316 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXG1P55316 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 AC097359.1-201ENST00000447946 463 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXG1P55316 ATP5G1P3-201ENST00000463301 410 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 AC025181.1-201ENST00000477507 416 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXG1P55316 AL117692.1-201ENST00000494283 713 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 BOLA3P3-201ENST00000505182 232 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXG1P55316 RNA5SP418-201ENST00000515951 117 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXG1P55316 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.69□□□□□ -1.5
FOXG1P55316 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 AP003033.2-201ENST00000528901 805 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
FOXG1P55316 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXG1P55316 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXG1P55316 RPL3P13-201ENST00000550415 216 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.69□□□□□ -1.5
FOXG1P55316 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXG1P55316 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXG1P55316 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXG1P55316 AC011891.2-201ENST00000604949 397 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXG1P55316 AC025171.4-201ENST00000607250 1047 ntBASIC5.69□□□□□ -1.5
FOXG1P55316 AC018645.2-201ENST00000609151 472 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms