Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCC3P46736 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BRCC3P46736 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCC3P46736 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCC3P46736 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCC3P46736 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.65□□□□□ -1.34
BRCC3P46736 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.65□□□□□ -1.34
BRCC3P46736 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BRCC3P46736 IPPKP1-201ENST00000422501 768 ntBASIC6.65□□□□□ -1.34
BRCC3P46736 AC130360.1-201ENST00000425489 1117 ntBASIC6.65□□□□□ -1.34
BRCC3P46736 AC097721.1-201ENST00000427150 1253 ntBASIC6.65□□□□□ -1.34
BRCC3P46736 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.65□□□□□ -1.34
BRCC3P46736 OR3D1P-201ENST00000438288 955 ntBASIC6.65□□□□□ -1.34
BRCC3P46736 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.65□□□□□ -1.34
BRCC3P46736 AC016724.1-201ENST00000453215 421 ntBASIC6.65□□□□□ -1.34
BRCC3P46736 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.65□□□□□ -1.34
BRCC3P46736 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.65□□□□□ -1.34
BRCC3P46736 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.65□□□□□ -1.34
BRCC3P46736 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.65□□□□□ -1.34
BRCC3P46736 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.65□□□□□ -1.34
BRCC3P46736 AC130365.2-201ENST00000525882 1201 ntBASIC6.65□□□□□ -1.34
BRCC3P46736 NANOGNBP2-201ENST00000544753 553 ntBASIC6.65□□□□□ -1.34
BRCC3P46736 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.65□□□□□ -1.34
BRCC3P46736 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.65□□□□□ -1.34
BRCC3P46736 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
BRCC3P46736 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.65□□□□□ -1.34
BRCC3P46736 LINC00556-201ENST00000569603 412 ntBASIC6.65□□□□□ -1.34
BRCC3P46736 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.65□□□□□ -1.34
BRCC3P46736 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BRCC3P46736 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
BRCC3P46736 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
BRCC3P46736 AC105749.1-201ENST00000631338 2008 ntBASIC6.65□□□□□ -1.35
BRCC3P46736 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
BRCC3P46736 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
BRCC3P46736 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
BRCC3P46736 PSG10P-201ENST00000501199 1500 ntBASIC6.65□□□□□ -1.35
BRCC3P46736 BIN2P1-201ENST00000504996 1530 ntBASIC6.65□□□□□ -1.35
BRCC3P46736 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.65□□□□□ -1.35
BRCC3P46736 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
BRCC3P46736 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.65□□□□□ -1.35
BRCC3P46736 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.65□□□□□ -1.35
BRCC3P46736 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
BRCC3P46736 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 AP000866.6-201ENST00000638898 3579 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCC3P46736 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCC3P46736 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
BRCC3P46736 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
BRCC3P46736 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 AL132875.1-201ENST00000403623 949 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 UBE2V1P14-201ENST00000415815 558 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCC3P46736 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCC3P46736 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 HSPE1P27-201ENST00000430808 296 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.64□□□□□ -1.35
BRCC3P46736 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCC3P46736 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCC3P46736 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCC3P46736 CST12P-201ENST00000457644 362 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 SNX18P26-201ENST00000458433 740 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 AC025458.1-201ENST00000506046 166 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 AC090958.1-201ENST00000511122 351 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 IGKV2-4-201ENST00000523070 340 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCC3P46736 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCC3P46736 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCC3P46736 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCC3P46736 AC233702.7-202ENST00000582941 211 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 AC027229.1-201ENST00000583887 253 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCC3P46736 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCC3P46736 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.64□□□□□ -1.35
BRCC3P46736 AC012254.5-201ENST00000623573 478 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCC3P46736 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCC3P46736 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 AC008627.1-201ENST00000517511 1704 ntBASIC6.64□□□□□ -1.35
BRCC3P46736 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.64□□□□□ -1.35
BRCC3P46736 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCC3P46736 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCC3P46736 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
BRCC3P46736 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BRCC3P46736 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCC3P46736 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCC3P46736 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCC3P46736 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms