Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC006213.5-201ENST00000619673 288 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PTPN9P43378 AC022726.2-201ENST00000634673 547 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 AP003486.1-201ENST00000525716 3994 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.61□□□□□ -1.35
PTPN9P43378 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 AC009779.8-201ENST00000641684 4384 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.6□□□□□ -1.35
PTPN9P43378 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PTPN9P43378 AL034417.1-201ENST00000399343 800 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 PRELID1P1-201ENST00000403549 660 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.6□□□□□ -1.35
PTPN9P43378 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 RPL12P49-201ENST00000441100 121 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 AL022237.1-201ENST00000446663 358 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.6□□□□□ -1.35
PTPN9P43378 RPS7P10-201ENST00000464254 603 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 RPL17P2-201ENST00000491913 451 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.6□□□□□ -1.35
PTPN9P43378 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.6□□□□□ -1.35
PTPN9P43378 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.6□□□□□ -1.35
PTPN9P43378 KHDC1P1-201ENST00000511053 508 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 MRPS5P3-201ENST00000515577 166 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 RNU6-964P-201ENST00000516524 69 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 AC087272.1-201ENST00000523624 533 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.6□□□□□ -1.35
PTPN9P43378 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.6□□□□□ -1.35
PTPN9P43378 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.6□□□□□ -1.35
PTPN9P43378 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.6□□□□□ -1.35
PTPN9P43378 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 OR7E91P-202ENST00000642062 1198 ntBASIC6.6□□□□□ -1.35
PTPN9P43378 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
PTPN9P43378 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTPN9P43378 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.6□□□□□ -1.35
PTPN9P43378 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.6□□□□□ -1.35
PTPN9P43378 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.6□□□□□ -1.35
PTPN9P43378 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTPN9P43378 AC006511.3-201ENST00000624929 1783 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTPN9P43378 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
PTPN9P43378 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
PTPN9P43378 AC092692.1-201ENST00000623625 2595 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.59□□□□□ -1.35
PTPN9P43378 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.59□□□□□ -1.35
PTPN9P43378 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTPN9P43378 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PTPN9P43378 RNU11-6P-201ENST00000391127 133 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 MTND3P20-201ENST00000407663 186 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.59□□□□□ -1.35
PTPN9P43378 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.59□□□□□ -1.35
PTPN9P43378 AC234771.2-201ENST00000445718 597 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 MORF4-201ENST00000447135 971 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 VPS25P1-201ENST00000455691 508 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.59□□□□□ -1.35
PTPN9P43378 RN7SL326P-201ENST00000477493 296 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 AGGF1P3-201ENST00000493675 1213 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 FTH1P8-201ENST00000498161 514 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 ACTR6P1-201ENST00000514311 1104 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.59□□□□□ -1.35
PTPN9P43378 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.59□□□□□ -1.35
PTPN9P43378 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.59□□□□□ -1.35
PTPN9P43378 MIR3189-201ENST00000578735 73 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms