Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.9□□□□□ -1.3
USP8P40818 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.9□□□□□ -1.3
USP8P40818 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.9□□□□□ -1.3
USP8P40818 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.9□□□□□ -1.3
USP8P40818 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.9□□□□□ -1.3
USP8P40818 MIR6503-201ENST00000622884 86 ntBASIC6.9□□□□□ -1.3
USP8P40818 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.31
USP8P40818 AC119674.1-213ENST00000641177 1386 ntBASIC6.9□□□□□ -1.31
USP8P40818 AC005702.3-201ENST00000585345 1447 ntBASIC6.9□□□□□ -1.31
USP8P40818 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
USP8P40818 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.9□□□□□ -1.31
USP8P40818 AL049634.1-201ENST00000453770 1720 ntBASIC6.9□□□□□ -1.31
USP8P40818 AC093671.1-201ENST00000624981 2929 ntBASIC6.9□□□□□ -1.31
USP8P40818 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
USP8P40818 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.9□□□□□ -1.31
USP8P40818 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.9□□□□□ -1.31
USP8P40818 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
USP8P40818 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.89□□□□□ -1.31
USP8P40818 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.89□□□□□ -1.31
USP8P40818 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 RNA5SP478-201ENST00000364657 115 ntBASIC6.89□□□□□ -1.31
USP8P40818 AL033519.1-201ENST00000407266 307 ntBASIC6.89□□□□□ -1.31
USP8P40818 RN7SKP221-201ENST00000410420 301 ntBASIC6.89□□□□□ -1.31
USP8P40818 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.89□□□□□ -1.31
USP8P40818 COL11A2P1-205ENST00000441798 676 ntBASIC6.89□□□□□ -1.31
USP8P40818 AL020997.1-201ENST00000446554 349 ntBASIC6.89□□□□□ -1.31
USP8P40818 AL034369.1-201ENST00000453808 477 ntBASIC6.89□□□□□ -1.31
USP8P40818 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.89□□□□□ -1.31
USP8P40818 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 AP005639.1-201ENST00000526939 192 ntBASIC6.89□□□□□ -1.31
USP8P40818 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.89□□□□□ -1.31
USP8P40818 HMGN1P26-201ENST00000558737 303 ntBASIC6.89□□□□□ -1.31
USP8P40818 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.89□□□□□ -1.31
USP8P40818 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.89□□□□□ -1.31
USP8P40818 AC004805.3-201ENST00000603178 310 ntBASIC6.89□□□□□ -1.31
USP8P40818 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.89□□□□□ -1.31
USP8P40818 LINC02495-203ENST00000636704 242 ntBASIC6.89□□□□□ -1.31
USP8P40818 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.89□□□□□ -1.31
USP8P40818 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
USP8P40818 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 AC005725.1-201ENST00000577346 2607 ntBASIC6.89□□□□□ -1.31
USP8P40818 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USP8P40818 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
USP8P40818 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
USP8P40818 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.88□□□□□ -1.31
USP8P40818 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
USP8P40818 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
USP8P40818 RNU1-84P-201ENST00000365447 164 ntBASIC6.88□□□□□ -1.31
USP8P40818 LCN1P2-201ENST00000372030 223 ntBASIC6.88□□□□□ -1.31
USP8P40818 ARSFP1-201ENST00000398758 477 ntBASIC6.88□□□□□ -1.31
USP8P40818 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.88□□□□□ -1.31
USP8P40818 U3.43-201ENST00000410734 213 ntBASIC6.88□□□□□ -1.31
USP8P40818 RPS26P38-201ENST00000414476 348 ntBASIC6.88□□□□□ -1.31
USP8P40818 RPS17P17-201ENST00000419392 409 ntBASIC6.88□□□□□ -1.31
USP8P40818 AL157884.1-201ENST00000424561 454 ntBASIC6.88□□□□□ -1.31
USP8P40818 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.88□□□□□ -1.31
USP8P40818 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.88□□□□□ -1.31
USP8P40818 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.88□□□□□ -1.31
USP8P40818 AC022730.1-201ENST00000473114 568 ntBASIC6.88□□□□□ -1.31
USP8P40818 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.88□□□□□ -1.31
USP8P40818 AC015524.1-201ENST00000491585 472 ntBASIC6.88□□□□□ -1.31
USP8P40818 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 AC106800.3-201ENST00000511389 308 ntBASIC6.88□□□□□ -1.31
USP8P40818 IGKV1D-22-201ENST00000518953 324 ntBASIC6.88□□□□□ -1.31
USP8P40818 AC084851.2-201ENST00000530377 364 ntBASIC6.88□□□□□ -1.31
USP8P40818 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
USP8P40818 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 CCDC58P1-201ENST00000578567 430 ntBASIC6.88□□□□□ -1.31
USP8P40818 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.88□□□□□ -1.31
USP8P40818 AL049840.6-201ENST00000604583 345 ntBASIC6.88□□□□□ -1.31
USP8P40818 AP000550.3-201ENST00000637734 379 ntBASIC6.88□□□□□ -1.31
USP8P40818 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USP8P40818 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.88□□□□□ -1.31
USP8P40818 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.88□□□□□ -1.31
USP8P40818 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms