Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 OR6R1P-201ENST00000431838 940 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AL365220.1-201ENST00000432923 399 ntBASIC6.26□□□□□ -1.41
RPA3P35244 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AC128677.1-201ENST00000436016 442 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.26□□□□□ -1.41
RPA3P35244 AC245291.3-201ENST00000443400 292 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.26□□□□□ -1.41
RPA3P35244 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.26□□□□□ -1.41
RPA3P35244 RBMY2HP-201ENST00000457961 720 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AC073594.1-201ENST00000462065 364 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AC128716.1-201ENST00000475129 166 ntBASIC6.26□□□□□ -1.41
RPA3P35244 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.26□□□□□ -1.41
RPA3P35244 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 RN7SL612P-201ENST00000497704 295 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.26□□□□□ -1.41
RPA3P35244 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.26□□□□□ -1.41
RPA3P35244 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.26□□□□□ -1.41
RPA3P35244 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RPA3P35244 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.26□□□□□ -1.41
RPA3P35244 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.26□□□□□ -1.41
RPA3P35244 AC009237.12-201ENST00000604755 742 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AC004890.3-201ENST00000605566 1095 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AC093388.1-201ENST00000609166 430 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AC006924.1-201ENST00000610750 559 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.26□□□□□ -1.41
RPA3P35244 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.26□□□□□ -1.41
RPA3P35244 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.26□□□□□ -1.41
RPA3P35244 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.26□□□□□ -1.41
RPA3P35244 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 AC114876.1-201ENST00000490962 1366 ntBASIC6.26□□□□□ -1.41
RPA3P35244 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
RPA3P35244 AL355834.1-201ENST00000556602 3965 ntBASIC6.26□□□□□ -1.41
RPA3P35244 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.26□□□□□ -1.41
RPA3P35244 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.26□□□□□ -1.41
RPA3P35244 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.26□□□□□ -1.41
RPA3P35244 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.26□□□□□ -1.41
RPA3P35244 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.25□□□□□ -1.41
RPA3P35244 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RPA3P35244 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
RPA3P35244 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
RPA3P35244 SNORD35A-201ENST00000363389 86 ntBASIC6.25□□□□□ -1.41
RPA3P35244 RNA5SP485-201ENST00000365053 119 ntBASIC6.25□□□□□ -1.41
RPA3P35244 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.25□□□□□ -1.41
RPA3P35244 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.25□□□□□ -1.41
RPA3P35244 VIM2P-201ENST00000402383 1294 ntBASIC6.25□□□□□ -1.41
RPA3P35244 AL157884.1-201ENST00000424561 454 ntBASIC6.25□□□□□ -1.41
RPA3P35244 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.25□□□□□ -1.41
RPA3P35244 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 AC064862.5-201ENST00000440618 334 ntBASIC6.25□□□□□ -1.41
RPA3P35244 RPL12P49-201ENST00000441100 121 ntBASIC6.25□□□□□ -1.41
RPA3P35244 AC004890.1-201ENST00000461005 181 ntBASIC6.25□□□□□ -1.41
RPA3P35244 AC090058.1-201ENST00000498788 435 ntBASIC6.25□□□□□ -1.41
RPA3P35244 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.25□□□□□ -1.41
RPA3P35244 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.25□□□□□ -1.41
RPA3P35244 AC138517.1-201ENST00000515724 568 ntBASIC6.25□□□□□ -1.41
RPA3P35244 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.25□□□□□ -1.41
RPA3P35244 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.25□□□□□ -1.41
RPA3P35244 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.25□□□□□ -1.41
RPA3P35244 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.25□□□□□ -1.41
RPA3P35244 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.25□□□□□ -1.41
RPA3P35244 AC025283.1-201ENST00000572039 734 ntBASIC6.25□□□□□ -1.41
RPA3P35244 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.25□□□□□ -1.41
RPA3P35244 AL589863.1-201ENST00000595383 631 ntBASIC6.25□□□□□ -1.41
RPA3P35244 AL049840.6-202ENST00000603373 279 ntBASIC6.25□□□□□ -1.41
RPA3P35244 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.25□□□□□ -1.41
RPA3P35244 GAPDHP41-201ENST00000613707 975 ntBASIC6.25□□□□□ -1.41
RPA3P35244 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.25□□□□□ -1.41
RPA3P35244 LINC02495-203ENST00000636704 242 ntBASIC6.25□□□□□ -1.41
RPA3P35244 OR7E91P-202ENST00000642062 1198 ntBASIC6.25□□□□□ -1.41
RPA3P35244 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.25□□□□□ -1.41
RPA3P35244 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.25□□□□□ -1.41
RPA3P35244 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RPA3P35244 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.25□□□□□ -1.41
RPA3P35244 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.25□□□□□ -1.41
RPA3P35244 VN2R1P-201ENST00000449668 1743 ntBASIC6.25□□□□□ -1.41
RPA3P35244 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RPA3P35244 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPA3P35244 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPA3P35244 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RPA3P35244 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms