Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SLC6A4P31645 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SLC6A4P31645 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC6A4P31645 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 RAD17P2-201ENST00000451754 1977 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC6A4P31645 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SLC6A4P31645 CASC19-261ENST00000641853 1638 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC6A4P31645 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
SLC6A4P31645 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SLC6A4P31645 RNA5SP512-201ENST00000364550 120 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 RNA5SP77-201ENST00000365394 120 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 RN7SKP187-201ENST00000365536 330 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SLC6A4P31645 RNU11-6P-201ENST00000391127 133 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 PTGES3P2-201ENST00000407942 482 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC6A4P31645 Z68868.1-201ENST00000429048 544 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC6A4P31645 AC009963.4-201ENST00000448535 339 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC6A4P31645 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC6A4P31645 OR9N1P-201ENST00000491296 333 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 RN7SL568P-201ENST00000493069 298 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.73□□□□□ -1.33
SLC6A4P31645 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.73□□□□□ -1.33
SLC6A4P31645 AC083906.1-201ENST00000509298 406 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 RN7SKP183-201ENST00000517169 324 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.73□□□□□ -1.33
SLC6A4P31645 AC135983.3-201ENST00000528049 1226 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.73□□□□□ -1.33
SLC6A4P31645 RPL3P13-201ENST00000550415 216 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC6A4P31645 AC009712.1-201ENST00000564938 316 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 MT1CP-201ENST00000567054 174 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 MIR4310-201ENST00000582950 57 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC6A4P31645 AL359704.2-201ENST00000604335 521 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 AC135178.6-201ENST00000605314 398 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 AF129408.1-201ENST00000608767 431 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 AC027449.1-201ENST00000608890 407 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 AP001264.1-201ENST00000620602 703 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC6A4P31645 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC6A4P31645 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC6A4P31645 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 AL031651.1-201ENST00000615357 1438 ntBASIC6.73□□□□□ -1.33
SLC6A4P31645 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC6A4P31645 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SLC6A4P31645 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC6A4P31645 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.73□□□□□ -1.33
SLC6A4P31645 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SLC6A4P31645 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC6A4P31645 PPBPP2-201ENST00000513150 1362 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AC090181.3-201ENST00000624777 1514 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.72□□□□□ -1.33
SLC6A4P31645 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC6A4P31645 OR2M1P-201ENST00000318104 951 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 MIR640-201ENST00000385086 96 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AC245036.1-201ENST00000391727 309 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AC003045.1-201ENST00000398779 713 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC6A4P31645 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.72□□□□□ -1.33
SLC6A4P31645 AL713922.1-201ENST00000416477 747 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 VN1R37P-201ENST00000419096 748 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC6A4P31645 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC6A4P31645 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC6A4P31645 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC6A4P31645 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC6A4P31645 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC6A4P31645 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC6A4P31645 AL606517.1-201ENST00000446914 387 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AC097359.1-201ENST00000447946 463 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.72□□□□□ -1.33
SLC6A4P31645 AL139156.3-201ENST00000454802 394 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC6A4P31645 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC6A4P31645 SUMO2P7-201ENST00000511179 285 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
SLC6A4P31645 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC6A4P31645 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC6A4P31645 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC6A4P31645 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms