Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RBMY2HP-201ENST00000457961 720 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 RN7SL836P-201ENST00000476140 296 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 RN7SKP64-201ENST00000517206 328 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 OR4A40P-201ENST00000533878 948 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AP000619.2-201ENST00000546014 969 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 RN7SL475P-201ENST00000583379 298 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC125494.2-201ENST00000602431 657 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC073046.2-201ENST00000604756 527 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 AL592429.1-201ENST00000403909 1473 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC217777.1-201ENST00000570034 1471 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AOX3P-204ENST00000491025 2107 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 AC004656.1-201ENST00000568479 4951 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 UBTFL2-201ENST00000411859 1191 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 OR5W1P-201ENST00000423705 938 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 AL157884.1-201ENST00000424561 454 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC245291.3-201ENST00000443400 292 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 AL022319.1-201ENST00000458183 1167 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 MARK2P8-201ENST00000476069 952 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 OR9A1P-202ENST00000484361 945 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 RN7SL649P-201ENST00000496974 275 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC106800.3-201ENST00000511389 308 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 COX6B1P4-201ENST00000519826 484 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 OR5D2P-201ENST00000524390 911 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC009120.3-201ENST00000563335 499 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 MIR7854-201ENST00000620068 65 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 AL353743.3-201ENST00000442109 1468 ntBASIC4.8□□□□□ -1.64
HLA-DMBP28068 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMBP28068 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMBP28068 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMBP28068 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMBP28068 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 SHQ1P1-201ENST00000437111 1544 ntBASIC4.79□□□□□ -1.64
HLA-DMBP28068 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMBP28068 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DMBP28068 MED28P4-201ENST00000433137 572 ntBASIC4.79□□□□□ -1.64
HLA-DMBP28068 SUMO2P8-201ENST00000434672 286 ntBASIC4.79□□□□□ -1.64
HLA-DMBP28068 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms