Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 Z93929.1-201ENST00000418200 1475 ntBASIC8.14□□□□□ -1.11
VARSP26640 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 AC073324.1-201ENST00000425993 1435 ntBASIC8.14□□□□□ -1.11
VARSP26640 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 AC092646.2-201ENST00000431242 2095 ntBASIC8.14□□□□□ -1.11
VARSP26640 LINC00294-201ENST00000631190 3306 ntBASIC8.14□□□□□ -1.11
VARSP26640 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
VARSP26640 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
VARSP26640 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 AL034372.1-201ENST00000407586 754 ntBASIC8.14□□□□□ -1.11
VARSP26640 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 AC007435.1-201ENST00000421086 415 ntBASIC8.14□□□□□ -1.11
VARSP26640 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC8.14□□□□□ -1.11
VARSP26640 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 AC069154.1-201ENST00000432914 542 ntBASIC8.14□□□□□ -1.11
VARSP26640 DEFA9P-201ENST00000433042 285 ntBASIC8.14□□□□□ -1.11
VARSP26640 AL441963.1-201ENST00000435137 792 ntBASIC8.14□□□□□ -1.11
VARSP26640 RPL22P17-201ENST00000438729 315 ntBASIC8.14□□□□□ -1.11
VARSP26640 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC8.14□□□□□ -1.11
VARSP26640 USP9YP15-201ENST00000442391 422 ntBASIC8.14□□□□□ -1.11
VARSP26640 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC8.14□□□□□ -1.11
VARSP26640 OR7E102P-201ENST00000448855 1015 ntBASIC8.14□□□□□ -1.11
VARSP26640 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC8.14□□□□□ -1.11
VARSP26640 MTCO3P11-201ENST00000455103 774 ntBASIC8.14□□□□□ -1.11
VARSP26640 RN7SL368P-201ENST00000473384 277 ntBASIC8.14□□□□□ -1.11
VARSP26640 AC244505.1-201ENST00000502642 307 ntBASIC8.14□□□□□ -1.11
VARSP26640 PDLIM1P4-201ENST00000504327 1006 ntBASIC8.14□□□□□ -1.11
VARSP26640 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 AC122718.2-201ENST00000505325 591 ntBASIC8.14□□□□□ -1.11
VARSP26640 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC8.14□□□□□ -1.11
VARSP26640 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.14□□□□□ -1.11
VARSP26640 GAPDHP44-201ENST00000513513 1007 ntBASIC8.14□□□□□ -1.11
VARSP26640 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC8.14□□□□□ -1.11
VARSP26640 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC8.14□□□□□ -1.11
VARSP26640 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC8.14□□□□□ -1.11
VARSP26640 AC009997.1-201ENST00000557862 129 ntBASIC8.14□□□□□ -1.11
VARSP26640 AC105275.2-201ENST00000567907 711 ntBASIC8.14□□□□□ -1.11
VARSP26640 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.14□□□□□ -1.11
VARSP26640 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC8.14□□□□□ -1.11
VARSP26640 AC025287.2-201ENST00000621911 668 ntBASIC8.14□□□□□ -1.11
VARSP26640 AC068205.4-201ENST00000637880 804 ntBASIC8.14□□□□□ -1.11
VARSP26640 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.14□□□□□ -1.11
VARSP26640 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
VARSP26640 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
VARSP26640 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 AC073055.1-201ENST00000456901 1621 ntBASIC8.14□□□□□ -1.11
VARSP26640 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
VARSP26640 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
VARSP26640 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
VARSP26640 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 CR383658.2-201ENST00000547576 1525 ntBASIC8.13□□□□□ -1.11
VARSP26640 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.13□□□□□ -1.11
VARSP26640 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.13□□□□□ -1.11
VARSP26640 SLC9B1P3-201ENST00000452667 1334 ntBASIC8.13□□□□□ -1.11
VARSP26640 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.13□□□□□ -1.11
VARSP26640 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
VARSP26640 RNA5SP27-201ENST00000363839 119 ntBASIC8.13□□□□□ -1.11
VARSP26640 RNA5SP336-201ENST00000364189 117 ntBASIC8.13□□□□□ -1.11
VARSP26640 RNU6-707P-201ENST00000364647 95 ntBASIC8.13□□□□□ -1.11
VARSP26640 RNU6-534P-201ENST00000364877 106 ntBASIC8.13□□□□□ -1.11
VARSP26640 ESD-201ENST00000378697 1079 ntTSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 AC007066.1-201ENST00000392902 381 ntBASIC8.13□□□□□ -1.11
VARSP26640 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 AL356776.1-201ENST00000406574 447 ntBASIC8.13□□□□□ -1.11
VARSP26640 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC8.13□□□□□ -1.11
VARSP26640 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC8.13□□□□□ -1.11
VARSP26640 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 MTCO1P3-201ENST00000429327 192 ntBASIC8.13□□□□□ -1.11
VARSP26640 AC073464.1-201ENST00000429823 534 ntBASIC8.13□□□□□ -1.11
VARSP26640 RPSAP53-201ENST00000433498 862 ntBASIC8.13□□□□□ -1.11
VARSP26640 RPS4XP4-201ENST00000443195 763 ntBASIC8.13□□□□□ -1.11
VARSP26640 AC244505.5-201ENST00000443639 207 ntBASIC8.13□□□□□ -1.11
VARSP26640 RPL7P31-201ENST00000450192 724 ntBASIC8.13□□□□□ -1.11
VARSP26640 RPL23AP35-201ENST00000451906 501 ntBASIC8.13□□□□□ -1.11
VARSP26640 RN7SL395P-201ENST00000462960 291 ntBASIC8.13□□□□□ -1.11
VARSP26640 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms