Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AP003385.1-201ENST00000426387 893 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC8.21□□□□□ -1.1
ERCC3P19447 ANKRD54P1-201ENST00000433115 471 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 RPL3P11-201ENST00000434028 1146 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC8.21□□□□□ -1.1
ERCC3P19447 MTND2P22-201ENST00000444325 1033 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC8.21□□□□□ -1.1
ERCC3P19447 AL451063.1-201ENST00000450164 1133 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 HMGB1P5-202ENST00000451497 985 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 CST12P-201ENST00000457644 362 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC8.21□□□□□ -1.1
ERCC3P19447 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
ERCC3P19447 AC113420.1-201ENST00000507903 571 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC8.21□□□□□ -1.1
ERCC3P19447 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.21□□□□□ -1.1
ERCC3P19447 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.21□□□□□ -1.1
ERCC3P19447 OR7E128P-201ENST00000532736 1024 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.21□□□□□ -1.1
ERCC3P19447 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC8.21□□□□□ -1.1
ERCC3P19447 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.21□□□□□ -1.1
ERCC3P19447 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.21□□□□□ -1.1
ERCC3P19447 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.21□□□□□ -1.1
ERCC3P19447 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.21□□□□□ -1.1
ERCC3P19447 AC024267.2-201ENST00000582737 417 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 RN7SL622P-201ENST00000585292 275 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.21□□□□□ -1.1
ERCC3P19447 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 PRR13P5-201ENST00000596581 442 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 AC012557.1-201ENST00000607115 611 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 AL035461.2-201ENST00000619201 524 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 AC025162.2-201ENST00000619602 560 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 AC211486.4-201ENST00000621495 113 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 AC007603.3-201ENST00000636915 979 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 AC116631.1-202ENST00000640984 683 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 CASC19-208ENST00000641056 1292 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 CASC19-227ENST00000641411 1285 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
ERCC3P19447 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.21□□□□□ -1.1
ERCC3P19447 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.21□□□□□ -1.1
ERCC3P19447 AC092725.2-201ENST00000567658 1389 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
ERCC3P19447 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
ERCC3P19447 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
ERCC3P19447 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.2□□□□□ -1.1
ERCC3P19447 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
ERCC3P19447 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
ERCC3P19447 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
ERCC3P19447 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 SMARCE1P1-201ENST00000417747 1186 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.2□□□□□ -1.1
ERCC3P19447 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 GAPDHP34-201ENST00000432112 823 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 RPEP4-201ENST00000437636 602 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 AC000041.1-201ENST00000439655 175 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 Z73417.1-201ENST00000447373 778 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 NPM1P9-201ENST00000453156 844 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 RPL5P12-201ENST00000477071 851 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 RN7SL502P-201ENST00000481857 290 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC8.2□□□□□ -1.1
ERCC3P19447 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.2□□□□□ -1.1
ERCC3P19447 AC105420.1-201ENST00000504389 582 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 AC022296.2-201ENST00000512424 202 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 RN7SKP11-201ENST00000517018 287 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 ST13P6-201ENST00000522430 1102 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC8.2□□□□□ -1.1
ERCC3P19447 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC8.2□□□□□ -1.1
ERCC3P19447 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC8.2□□□□□ -1.1
ERCC3P19447 FAM106CP-201ENST00000582212 507 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 AC009779.8-202ENST00000607990 932 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 AC019131.2-201ENST00000609071 870 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 RN7SL126P-201ENST00000616400 299 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 AL139254.2-202ENST00000641937 1156 ntBASIC8.2□□□□□ -1.1
ERCC3P19447 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 SUCLA2P2-201ENST00000417269 1309 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms