Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 AC026951.1-201ENST00000559530 2459 ntBASIC3.66□□□□□ -1.82
APOBP04114 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC3.66□□□□□ -1.82
APOBP04114 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.66□□□□□ -1.82
APOBP04114 AL663074.2-201ENST00000440621 479 ntBASIC3.66□□□□□ -1.82
APOBP04114 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.66□□□□□ -1.82
APOBP04114 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC3.66□□□□□ -1.82
APOBP04114 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.66□□□□□ -1.82
APOBP04114 RNF138P2-201ENST00000603490 592 ntBASIC3.66□□□□□ -1.82
APOBP04114 AL023583.1-201ENST00000607518 1143 ntBASIC3.66□□□□□ -1.82
APOBP04114 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC3.66□□□□□ -1.82
APOBP04114 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 GAPDHP24-201ENST00000328713 983 ntBASIC3.66□□□□□ -1.82
APOBP04114 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
APOBP04114 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 MTCYBP21-201ENST00000443300 1113 ntBASIC3.66□□□□□ -1.82
APOBP04114 RPS3AP41-201ENST00000462701 778 ntBASIC3.66□□□□□ -1.82
APOBP04114 AC020898.1-201ENST00000474167 787 ntBASIC3.66□□□□□ -1.82
APOBP04114 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC3.66□□□□□ -1.82
APOBP04114 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 RBM22P1-201ENST00000578589 1214 ntBASIC3.66□□□□□ -1.82
APOBP04114 MIR3934-201ENST00000579806 107 ntBASIC3.66□□□□□ -1.82
APOBP04114 AC027348.2-201ENST00000624375 642 ntBASIC3.66□□□□□ -1.82
APOBP04114 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
APOBP04114 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 AL157831.2-201ENST00000564681 3095 ntBASIC3.66□□□□□ -1.82
APOBP04114 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 AC092070.2-203ENST00000598377 3644 ntBASIC3.66□□□□□ -1.82
APOBP04114 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 AL133173.1-201ENST00000423458 397 ntBASIC3.66□□□□□ -1.82
APOBP04114 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC3.66□□□□□ -1.82
APOBP04114 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.66□□□□□ -1.82
APOBP04114 OR7E157P-201ENST00000494376 911 ntBASIC3.66□□□□□ -1.82
APOBP04114 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 CYP4F35P-202ENST00000636121 390 ntBASIC3.66□□□□□ -1.82
APOBP04114 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
APOBP04114 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
APOBP04114 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOBP04114 PARP4P2-201ENST00000446672 3326 ntBASIC3.65□□□□□ -1.82
APOBP04114 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
APOBP04114 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC3.65□□□□□ -1.82
APOBP04114 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
APOBP04114 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
APOBP04114 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
APOBP04114 OR10R3P-201ENST00000361688 942 ntBASIC3.65□□□□□ -1.82
APOBP04114 RNA5SP350-201ENST00000363298 111 ntBASIC3.65□□□□□ -1.82
APOBP04114 AC009804.1-201ENST00000400949 179 ntBASIC3.65□□□□□ -1.82
APOBP04114 RNA5SP156-201ENST00000410250 110 ntBASIC3.65□□□□□ -1.82
APOBP04114 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.65□□□□□ -1.82
APOBP04114 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.65□□□□□ -1.82
APOBP04114 RN7SL57P-201ENST00000493687 290 ntBASIC3.65□□□□□ -1.82
APOBP04114 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.65□□□□□ -1.82
APOBP04114 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
APOBP04114 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
APOBP04114 MBP-206ENST00000397863 4800 ntTSL 3 BASIC3.65□□□□□ -1.82
APOBP04114 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 EDA-213ENST00000616899 4643 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
APOBP04114 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
APOBP04114 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
APOBP04114 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 AL136531.3-201ENST00000624378 3658 ntBASIC3.65□□□□□ -1.82
APOBP04114 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC3.65□□□□□ -1.82
APOBP04114 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.65□□□□□ -1.82
APOBP04114 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 OR52B5P-201ENST00000435337 951 ntBASIC3.65□□□□□ -1.82
APOBP04114 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.65□□□□□ -1.82
APOBP04114 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 LDHBP2-201ENST00000456969 1005 ntBASIC3.65□□□□□ -1.82
APOBP04114 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC3.65□□□□□ -1.82
APOBP04114 AC083982.1-201ENST00000485679 344 ntBASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms